Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01699 ATGGCGTCTCTTCTGCTCCTCAACCACCTCCAATCTCCTCCCCTTTCACCACCACACGCCACCACCTTCAACAACACACCAACCACAACCCTCTCATTCTTTTCCAAAACCAAACCCCCATTCATCCTCAAATGCTCTTCCACCTCAAACCTAAGCCCAAAACTGGACCAAGAAGACGTCCAAGGAAAAGAACAAGAAACATTTGATTTTGAGGCTCCCTTGAGCCAAGTGTGGAGGGAAATCCAAGGCATGAAGGATTGGAAAGGGTTGATAGAGCCAACCATGAACCCTCTCCTCCGGCGAGAAATAATCCGGTATGGGGAACTGGCACAGGCATGCTACGACTCCTTCGACTTCGACCCTCATTCCAAGTACTGCGGAACCTGCAAGTACCATCCCTCCCACTTCTTCCACCAACTCAGCATTCCCCACTCCGGCTACACCATCACCCGCTACCTCTACGCCACCTCCAACATCAACCTCCCCAACTTCTTCCAGAAGTCCAACCTCGCCTCCGTCTGGAGCCCGCACGCCAACTGGATGGGCTACGTCGCCGTCATCACCGACAAGGAACACATCAAACACCTCGGTCGCCGCGACATCCTAATTGCATGGCGCGGAACAGTCACCTACGTCGAATGGATCCACGACCTCAAAGACATTCTCCGTCCCGCGCTCTTCTCCAGAGACCAAACCATCAAGGTAGAATCTGGATTCCACGACTTGTACACCAAGAAAGAACACTCCTGCACCTATTGCTCTTTCTCGGCTCGCGAACAAGTACTCTCAGAGGTTAAACGTCTTCTTAACTACTACAAAGACGAAGAGATAAGCATCACCGTCACCGGGCACAGTCTCGGTGCTGCGTTGGCCGTTCTGAGCGCGTACGACATAGCCGAGGTTAGGTTAAACGTGGTTGGCGACGGTGGTGAACGTGTTCCCGTGACGGTGTTTTCGTTTGCGGGGCCTAGGGTTGGGAATTTGAAGTTTAAAGAGCGGTGTGAGGAGCTCGGGGTGAAGGTTCTGAGAGTGGTGAACGTGCACGATGTGGTACCCACCGTGCCGGGGATAATAACGAACGAGAAGTTTCGGTTTCAGAAGTACATAGAGGATGCGCTGTCGTTTCCGTGGAGCTATGCGCACGTGGGGACGGAGATTGCGTTGGATCACAGAGAGAGTCCGTTCGTGAAGGGGAACGTGGATCTGGTGAGTGCGCATAACTTGGAGGTTCATCTGCACCTCGTTGATGGCTACCATGGGAAGGAAAAGAGGTTCTGCTTGGCGTCGAAGCGTGACATAGCGCTTGTGAACAAGAGCTGTGACTTTCTCAGGAGTGAGTACGGCGTTCCGCCGAACTGGCGGCAGGACGAGAACAAGGGGATGGTGAGAGGCGGCGATGGGCGGTGGGTTCTGCCGGAGCGCCCCAGATTGGAGGCTCATCCACCAGACATGGCCCACCATCTCCAGCAAGTGTTGGACAACCACCTCGCAGGTCAGCAATTAGAAACCACTTAA 1515 0.5386 MASLLLLNHLQSPPLSPPHATTFNNTPTTTLSFFSKTKPPFILKCSSTSNLSPKLDQEDVQGKEQETFDFEAPLSQVWREIQGMKDWKGLIEPTMNPLLRREIIRYGELAQACYDSFDFDPHSKYCGTCKYHPSHFFHQLSIPHSGYTITRYLYATSNINLPNFFQKSNLASVWSPHANWMGYVAVITDKEHIKHLGRRDILIAWRGTVTYVEWIHDLKDILRPALFSRDQTIKVESGFHDLYTKKEHSCTYCSFSAREQVLSEVKRLLNYYKDEEISITVTGHSLGAALAVLSAYDIAEVRLNVVGDGGERVPVTVFSFAGPRVGNLKFKERCEELGVKVLRVVNVHDVVPTVPGIITNEKFRFQKYIEDALSFPWSYAHVGTEIALDHRESPFVKGNVDLVSAHNLEVHLHLVDGYHGKEKRFCLASKRDIALVNKSCDFLRSEYGVPPNWRQDENKGMVRGGDGRWVLPERPRLEAHPPDMAHHLQQVLDNHLAGQQLETT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01699 504 CDD Lipase_3 152 391 - -
Vian5g01699 504 Gene3D alpha/beta hydrolase 77 483 IPR029058 -
Vian5g01699 504 FunFam Phospholipase A1-II 3 77 481 - -
Vian5g01699 504 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 16 475 - -
Vian5g01699 504 SUPERFAMILY alpha/beta-Hydrolases 103 394 IPR029058 -
Vian5g01699 504 Pfam Lipase (class 3) 203 357 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01699 Vian-Chr5 39428937 39430451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01699 74 492 Acyl Lipid Metabolism Gene Families AT1G51440 72.960 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01699 - - gmx:100795661 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01699 5 39428937 39430451 Vian5g01699 5 39428937 39430451 ECH