Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01698 ATGGCGATCGCTTTCTCCTTCTTCACTGCGCCCACTTCATCTTCATATTCATTCTCTTCTTCCAAAGCCGTTCCTTCTCTTTCCCTTTCTTCCTCCCTCGGCATCCGCATCCCGCGGCGCGCGGATCGCTTTTTCCCTCTCTGCACCACAATAGGAGCCTCTGTCGGCGGATCCTTCGGAGGACACGGTGGCGGACATGATGGTCACGGACATGGCGGTGGTGGCGGCGGCGGTGACGACGAGCACGGCAATGAGGGAAGGAACGAGGCCTTGATGGTCGTGGCGGAGGCGGGGAGGGCGTTGGAGAGCGTGCCGGCGGATTTGGCGGCGGCGATAAAGGAGGGAAAGATTCCGGCGGCGGTGGTGACGCGGTTTTTGGAGCTGGAGAAATCCGCGTTCTTCCGGTGGCTGCTTCAGTTTCCCGGTTTCAGAGAGCGTCTCCTCGCCGATGATCTCTTCCTCGCGAAAGTCGCCATGGAATGCGGCGTTGGCGTCTTCACCAAGACTGCTGCTGAGTACGATCGAAGAAGAGAAAACTTTTTCAATGAGCTCGAAATCGTCTTCGCCGATGTGGTGATGGCCATCATTGCAGATTTCATGCTGGTTTATCTTCCTGCGCCTACTGTTGCGCTTAGACCGCCACTCGCAGGCACTGCAGGGCCTATTGCTAAGTTTTTCCATGGCTGCCCGGATAATGCTTTTCAGGTTGCTCTGTCTGGGACATCATATTCATTGATACAGAGGATTGGTGCAATTGTGCGTAATGGGTCTAAGCTTTTTGCTGTTGGTACTGCTTCATCGCTGGTTGGTACTGCTATGACAAATGCCTTAATCAATGCAAAGAAAGCAGTTAAATCTTCGGAAGGGGAAATTGAAAATGTTCCCATATTGTCTACCAGTGCTGCCTATGGTGTCTATATGTCTATTTCTAGCAACCTCAGGTATCAAGTAGTTGCTGGAATTATTGAACAGAGGCTTTTGGAACCTTTGCTGCACCAGCACAAGCTAATTCTCAGTGCACTGTGTTTCGCTGTGCGAACTGGCAACACTTATTTGGGTTCACTACTGTGGGTGGATTATGCTCGTTGGATAGGTGTTCAGTAG 1104 0.5208 MAIAFSFFTAPTSSSYSFSSSKAVPSLSLSSSLGIRIPRRADRFFPLCTTIGASVGGSFGGHGGGHDGHGHGGGGGGGDDEHGNEGRNEALMVVAEAGRALESVPADLAAAIKEGKIPAAVVTRFLELEKSAFFRWLLQFPGFRERLLADDLFLAKVAMECGVGVFTKTAAEYDRRRENFFNELEIVFADVVMAIIADFMLVYLPAPTVALRPPLAGTAGPIAKFFHGCPDNAFQVALSGTSYSLIQRIGAIVRNGSKLFAVGTASSLVGTAMTNALINAKKAVKSSEGEIENVPILSTSAAYGVYMSISSNLRYQVVAGIIEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARWIGVQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01698 367 MobiDBLite consensus disorder prediction 59 85 - -
Vian5g01698 367 Pfam Protein RETICULATA-related 145 321 IPR021825 -
Vian5g01698 367 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 60 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01698 Vian-Chr5 39422804 39425497 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01698 - - gmx:100811998 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01698 5 39422804 39425497 Vian5g01698 5 39422804 39425497 ECH