Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01696 ATGGATAGCTTACAAGCCACTTACAAAGACGAAGAAGATGAAGAAGACGAGGTGCCACCACCCACCACCACCGCAAACACCGCCCTAGCCACAGACTCCGAATCGCCGGAAGCTCCTCCTGCCACCACCAGCACGCCCTCTGATACCCCAACCGAGCACCCCAACGACGCGCGATCGGAGCCCGACCCTTCCGACGAACTCTCAGACGACGAGGCCGCCTCCGACGGATCCAAAAAGTCCCCGAAGTCCGGCCGCGAAGAAGGCGACGCTTCTGAGGAGGAGCCGCCGCCGAAGAAACAGAAGCAGCTCTCCTCTATTACGGCGGAGGCGTCGAAGGAGGACTCGCCTGTGCCAGCGACGGCGGAGGGCGCCAACAATGCGACTACTCCCGCTGCGAACGGCTCGGCGCCGAACGCCAAGAAATCGAAGAAGAAGAACAATAACGTGTGGGCGACCAAGTCGACGCGGAAGGGGAAGAAGAAAAACAACCGCAACAACAACAACGGCAACAACAATAACCATGCAAACGGTGAGGACAACGTGCTGATTACGCCGGTGCCGCGGTTTCCCGACAAGAGCGACGACACAGCGGAGATGAAGATTTGCCTGTCGAAGGTTTACAAAGCAGAGAAGGTGGAATTGAGCGAGGACAGAATGAGTGCGGGGAGCACCAAGGGTTACAGAATGGTGAGGGCAACGCGCGGAGTCGTGGAAGGCGCGTGGTACTTCGAGATTAGGGTTGTGAAGTTGGGGGAGACTGGGCACACGCGCCTTGGGTGGTCGACTGAGAAGGGTGACTTGCAGGCTCCGGTTGGGTACGATGGGAACAGTTTTGGCTATCGGGACATTGATGGGAGTAAGATTCATAAGGCGAGTAGGGAGAAGTATGGAGAGGAAGGTTACAAGGAAGGGGATGTTATTGGTTTCTACATCAATTTGCCTGATGGCAAAAATTACGCCCCCAATACACCTCAGTTGGTCTGGTATAAAGGCCAGCGATATGTTTGCGCTCAAGATGCTAAGGAAGATCCACCCAAAGTGGTGCCTGGAAGCGAGATATCATTCTTTAAAAATGGCATATGCCAAGGTGTAGCTTTCAAGGATCTTCACGGTGGTCGTTACTATCCTGCCGCATCAATGTTTACTCTACCCAATGAACCAAACTGCACGGTTAAGTTCAACTTTGGTCCTGACTTTGAATGTTTTCCTGAGGATTTCATTGAACGACCAATTCCTAGGCCAATGATCGATGTTCCTTATCACGGTTTTGACAATCGAGTTGAAAATGGAGAATCTAATGAGAAGAAACCCCAGAAAGAGTGA 1323 0.5306 MDSLQATYKDEEDEEDEVPPPTTTANTALATDSESPEAPPATTSTPSDTPTEHPNDARSEPDPSDELSDDEAASDGSKKSPKSGREEGDASEEEPPPKKQKQLSSITAEASKEDSPVPATAEGANNATTPAANGSAPNAKKSKKKNNNVWATKSTRKGKKKNNRNNNNGNNNNHANGEDNVLITPVPRFPDKSDDTAEMKICLSKVYKAEKVELSEDRMSAGSTKGYRMVRATRGVVEGAWYFEIRVVKLGETGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHKASREKYGEEGYKEGDVIGFYINLPDGKNYAPNTPQLVWYKGQRYVCAQDAKEDPPKVVPGSEISFFKNGICQGVAFKDLHGGRYYPAASMFTLPNEPNCTVKFNFGPDFECFPEDFIERPIPRPMIDVPYHGFDNRVENGESNEKKPQKE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01696 440 CDD SPRY_Ash2 212 399 - -
Vian5g01696 440 MobiDBLite consensus disorder prediction 164 179 - -
Vian5g01696 440 ProSiteProfiles B30.2/SPRY domain profile. 181 400 IPR001870 -
Vian5g01696 440 Gene3D - 199 414 IPR043136 -
Vian5g01696 440 FunFam Protein TRAUCO 200 413 - -
Vian5g01696 440 MobiDBLite consensus disorder prediction 20 52 - -
Vian5g01696 440 SMART SPRY_3 238 399 IPR003877 GO:0005515
Vian5g01696 440 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 10 434 IPR037353 GO:0048188|GO:0051568
Vian5g01696 440 SUPERFAMILY Concanavalin A-like lectins/glucanases 201 403 IPR013320 -
Vian5g01696 440 MobiDBLite consensus disorder prediction 1 183 - -
Vian5g01696 440 MobiDBLite consensus disorder prediction 71 99 - -
Vian5g01696 440 MobiDBLite consensus disorder prediction 121 153 - -
Vian5g01696 440 Pfam SPRY domain 241 316 IPR003877 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01696 K14964 - gmx:100816796 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01696 5 39396897 39400523 Vian5g01696 5 39396897 39400523 ECH