Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01677 ATGGTGAGAAAACATGGCTGGCAATTACCTGCTCACACTTTTCAGGTTGTTGCGATCACTGTATTTTGCTTGTTGGTGATTGCTTTCTATGCTTTTCTTGCTCCCTTCATTGGAGGTCGTATATGGGAATACATTTTCATTGGTGTTTACTCTCCTGTGGCACTCATTGTGTTCATTCTTTACGTCAGATGCACTGCAATCAACCCTGCTGATCCGGGCATTATGTCTAAGTTTGACCCCAGAGTGGGAAATAATTTCAATTCTGTTCATGAATTGTCAGGAAAACATCACATTTCGGAACATGAACGCATTGCTGCCAGAGAACAATATTCTCCATCATCTTCCAAAAGGTCTATGACAAATATGAGCAAGAAAAGCTCGGTGGAAGATATGGACAGGGCAGACAGTTCAAGGAAACAGAATAACCAAAGCTCATGTAATGTAGTTGGAGGAATTTTCTGCATACTATTTTCACATGAAGATTGCCGAAAACAAGAAGCATCGACTGAGGAGCAGGGTGGTGGTGAGGATGCACTGTTCTGCACTTTGTGCAATGCTGAGGTGCGCAAGTTCAGCAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTTAACAATTGTGTGGGTCACAAAAATTACAGTTCTTTTATTGCTCTCATGGCTTTTAGTCTTGCTTGGCTAGCCATTGAAGCTGGAGTGGGTGTTGCGGTTTTTGTCCGTTTCTTTGTCAATAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGGCCCCCATTTGCTGCCGTTGTGGTCGTATGTACTGTAGTTTCTATCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATACTAATCAGGAAGGGCATTACTACTTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCTGTGGAAGATGAATTGCCAAATATACTTTACTCTCCAACAGGCTCAGCCACGACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAATATAAAGGAGCTTGGTGCACCCCTCCCAGGGTATTTGTTGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTACCGTCTACTGTTGATCCAGATGCAGCGGGTATTGCAGAAAGAGGGCAAAAGATGCCAAAAAGACCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAGTTGGATTCACAAGAGGCTGTGAGAGCAGCTGCGAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGACAGCCACCGCCTACCAGATGCAGAATTGAGTTCTAGTGGCAACATGAGCATCAGAAGTAGTTTGAGCACTGAGACTGGAACTAACAAGGAAATTAAACACGAGTTAAGATTGTCTCCGGTCCAAAATTCTATTGCTCCTAGTCAAGGAAGTCGCGATGAGTATGAGACTGGAACTCAAAGTATGAGTAGCTTCAGCAGTCCTAGCCATGTTCATGAGGCAGTTACACTCAGCCCTCTTCCACAGGGTCACAGTTTGGGTGGCTTCAGGTCAGGTGCCTCAATCCCTGGTTTGGTGGTGCCTGAACGTCCTTTAACTTCTAAAGCAACATTGTCAAACTTCAGGAACCCAATATCTAATCCATCTCTTGGATTTGATGGGAGGACAGCAATGCCAAAAGGAATTGGCCATGATCCATTGTTGCTTTCTGCTTCTAACACTTCTATTCTAAGAGATGTGAAACGGTCATCAGTTGTTTGGGATCAAGAAGCTGGCAGATACGTTTCAGTCCCTTTATTGCCGTCAGAAGCCCGAAATAGGTCATCAATGCGTGTAGAATTGCAAAATGTAAATGCTGAAACAAGCAGTTTTGGGAAAAAACCAGTGATTCCGCAGCAGCAGGAGTTGTCATCATCTGCACCCAAGTCTCCAGGGCAGCATAGACAGAATCTGATGTATACAGGAGATTCTATCTTTTATGGAGGTCCATTTTTGAGTGCCCCTATTAAAGATGGTTTGAAAAATGAAAGACGTTTGGCATCAGGGGAGGCGCAAGATAACATATCGGCGAACTTGCCCCTAGAGCCAAGATATAAAAGGGACTCTCTTTCAAATCAGCTTCCCGTGTTTGTCCCTGGTGGATTTGAGAATAACCTTCAACCTCGTTCTGGCATGAATTAG 2214 0.4413 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFIGGRIWEYIFIGVYSPVALIVFILYVRCTAINPADPGIMSKFDPRVGNNFNSVHELSGKHHISEHERIAAREQYSPSSSKRSMTNMSKKSSVEDMDRADSSRKQNNQSSCNVVGGIFCILFSHEDCRKQEASTEEQGGGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGHKNYSSFIALMAFSLAWLAIEAGVGVAVFVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVVVCTVVSILACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPAGASVEDELPNILYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGIAERGQKMPKRPVRISAWKLAKLDSQEAVRAAAKARASSSVLRPVDSHRLPDAELSSSGNMSIRSSLSTETGTNKEIKHELRLSPVQNSIAPSQGSRDEYETGTQSMSSFSSPSHVHEAVTLSPLPQGHSLGGFRSGASIPGLVVPERPLTSKATLSNFRNPISNPSLGFDGRTAMPKGIGHDPLLLSASNTSILRDVKRSSVVWDQEAGRYVSVPLLPSEARNRSSMRVELQNVNAETSSFGKKPVIPQQQELSSSAPKSPGQHRQNLMYTGDSIFYGGPFLSAPIKDGLKNERRLASGEAQDNISANLPLEPRYKRDSLSNQLPVFVPGGFENNLQPRSGMN 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01677 737 MobiDBLite consensus disorder prediction 479 505 - -
Vian5g01677 737 MobiDBLite consensus disorder prediction 630 661 - -
Vian5g01677 737 MobiDBLite consensus disorder prediction 428 505 - -
Vian5g01677 737 MobiDBLite consensus disorder prediction 107 143 - -
Vian5g01677 737 MobiDBLite consensus disorder prediction 108 125 - -
Vian5g01677 737 ProSiteProfiles DHHC domain profile. 179 229 - -
Vian5g01677 737 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 315 - -
Vian5g01677 737 Pfam DHHC palmitoyltransferase 178 313 IPR001594 GO:0016409
Vian5g01677 737 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01677 Vian-Chr5 39194359 39200822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01677 180 310 Lipid Metabolism Gene Families AT4G22750 28.244 3.36e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01677 K20027 - gmx:100805779 1295.41