Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01674 ATGGAAGAAGAGACCAAAGTCGTATCAGAGGTTGTTGTGGAGGCAGATCATAAGAATGACGCCATCAAGGAGACAAATGGAGGCTTGTCAAGTGAAGTAAAGAAAGAAGAGGAAGAGAATGCCTTAGATGGAGAATTTATAAAAGTTGAGAAAGAAGAGAATGCCACAGATGATAAGTCCCACAAAACTGAAAGAAGCTCAGATTCTCCGAGCAGAGAATTTCTAGAAGCTCAAGAGAAGATACGGGAACTTGATGTTGAACTCCAAAGACTAACAGAATCGTTGAAGACCTCTGAGCATGAAAACATTCAGCTGAGGGGAGAGATCTCAGTTACACAACAGAAATTGGAGGAAAGTGGTAAGAAATACGAAGAGCTTGAACTGAGTCACAAGAAATTGCAAGAGCAGACGGTTGAAGCCGAGAATAAATATAATCAGCAGCTGAGCAATCTTGAAGAGGCACTTCAGAGTCAAGAAGTGAAGCAAAAGGAGCTTCTTCATGTGAAGGAAGCATTCGACGATATTAACCTTGAGCTTGAAAACTCCAGAAAGAAGATGCAGGAATTGCAGGACGAGCTGAAACTTTCAGCAGACGAGGCTCGGAAATTCGAGGAACTTCATAAGCAGAGTGGTTCACATGCTGAATCCGAGGGAAAGAAGGCCTTAGAATTTGAGAGACTACTTGAAGAAGCCAAACTGACTGCAAAAGGAATGGAAGATGAGATGGCCTCCCTTAAAGAAGAACTGAAAGGTGTGTATGATAAGATTTCAGAAAATCAAAAGATTGAAGAAGCACTTAAAACAACCACAGCTGAACTTTCTACTATCCAAGAGGAGTTGACACTTTCAAAATCACAGTTGTTGGAAGTTGAGAAAAGACTGTCTTCAAGGGACTCTTTAGTGGATGACTTGACTCGGGAAGTAAACCTGATAAAGACATCAGAAACACAGCTAAAGGAAGACATGTCAGCACTTCAAAATCTATTGGCCACATCGAAGGAAGAACTGCAAGAAAAAAATTCTGAATTGGAAACTGCGAGGTCCAAATTGCGGGAGGAGGAAAAATTGAGGGAATCAATTGAAGCTGCCCTCAAGAATCAAGAAACACAGTTTCTCAATGTAAAAGAGGAGCTGACTAAGCTTAAAACAGAAAATGGAACTCTTGAAGCAACCGTGGAAGATCTAACCCTTAATTCAAAGAAGTTTGAGGAGTTATGCGCTGATTTAGAGGGAAAACTAAAGCTATCAGATGAAAACTTTCTTAGAACAGATTCTCTTTTATCTCAGGCGCTTTCAAACAATGCAGAGCTCGAGCTGAAGGTGAAGTCGCTAGAAGATCTCCATAATGAATCTGGCGCTGCTGCAGCTACTGCTACTCAAAGGAGCCTTGAACTTGAGGGACATATTCAGACTTCCGTTGAAGCTGCAGAAGTGGCAAAATCACAATTGAGGGACCTGGAAACACGCTTCATAGCAGCAGAGCAGAAGAACGTGGAGCTTGAGCAACAGTTAAACTTACTACAATTGAAAACCAGTGATGCTGACAGAGAAGTAACTGAGTTGTCCGAAAAAATATCCCATCTCAATGCTAAATTGGAAGAGACCGAGAAAGAGAAGAATCTTCTTAACGACCAATTGCAAGAGTATATGGAAAAGGTCGTTCAACTTGAATCAGACTTGAATCAATCATCTTTGCGGAGTTCAATATTGGAGGAGGAGCTGAAGAAAGTCAATGACAAATGTTCTGAGCATGAAGACCGAGCCACTATGAACCATCAGCGTAGCAGAGAACTGGAAGATTTAATCCAGAGCTCTAACTCCAAATTGGAAGATTCTGGTAAAAAGGTGAGTGAGTTGGAGTTGTTACTTGCAGCAGAGAAATACAGAATTCAGGAACTTGACCAACAAATAAGCACATTAGAAGACAAAAGCAGGGTTTCAGATGAGCAAAACAATAAATACCTCAACGATTTGTCTAATTTAACATCAAATCTTGAGGCAATTCAGACACGAACGTCAACCCTCGAAGTTACACTGCAAGCAGCTAATGAAAGAGGAAAGGAGTTGGAAGATTCTCTGAATTCGATGACGGATGAAAAGAAGAAGTTAGAAGATGCTTCTAGCAGTTTGAATGAGAAGCTTGCTGAGAAAGAAAACCTATTGGAAATTTTGAGGGATGATTTAAATCAAACACAAGGTAAATTGCAAAGCACTGAAAGTGATCTCAGGGCTGCTGAATTGAGAGAGAGTGATATAATTGAGAAACTTAAAGCTTCTGAAGAAAATCTTGTCATTAGAGGAAGAGATATAGAGGAAACTGCTACAAGACACTCGGAACTTCAATTGTTGCATGAGTCTCTGACGAGAGATGCAGAACAGAAACTCCAGGAAGCTGTAGAAAACTTCAGCAACAAGGATTCTGAGGTTCAGTCTCTGCTTGAGAAAATTAAGATTTTGGAGGAACTGATTACACGGGGTGGGGAACAGTCTACATCCTTGAAGAATCAACTTGAAGAGAGTTTGAGTAAACTTTCTTCTTTGGAAAGTGAAAACGAAGTTTTGAAACGACAAGTTCTAGAAGCCGAGAGCAAGATTTCTCAGTCTTTTTCTCAAAATGAATTATTGGTTGGAACAAACATCGACCTGAGAACCAAGATTGATGAACTTGAGGAATCACTGAACCGTGCACTATCAGAGAAGGATGACACAAATCAAGAACTTGTGGCCCATAAGAACAGTCTAGCTGAATTGAATGATTTACAATCAAAATCCACTCAAATTCAAAGTGCAAATGAATCCCGCATTCTAGAAGTAGAATCACAATTACAAGAAGCGTTGCAGAGGCATACTGAGAAGGAATCAGAAACCAAAGTGTTGAATGAGAAGCTGAATACACTAGAGAACCAAATAAAGCTTTTCGAAGAACAGGCACTAAACGCAGTTGTAGCTTCTGGAACTCAAAAAGATGAGCTGGAGGAGAGTCTCATAAAATTAAAGCACCTTCAAACTGTCATTGAGGAACTGCAAAACAAGTCACTCCACCATGAAAAAGAAACTTCTGGGCTAAATTATGAAAACTCAAAGCTTAATGAGGAAATAGCTATCTATGAATCCAAATTAAGTGATTTGCAGTCAAAGCTCTCTGCAGCACTTGCTGAGAAGGATGAAACAGTTAAAGAGATACTCACCTCGAAGAATGCCATCGAAGAATTAGTGTCAAAGCATAGTGCAGAGGTGCAGACGCTGAATTCACAGTTATCTTCAGTGATTGATGAGAAGAACTTGCTAAATGAGACTAATCAGGATATAAAGAAGGAACTTCAGTCTTTTATACTTGACCTTGAAGAGAAGTTGAAGGAACAACAGAAAATTGAAGGCTCTCTGAGATATGAGATCGAAATTCTCAAAATGGAGATTGCTGAGAAATCTGAACTAAATGAAGAGGTTGGAAGTGTTCAAGCTGCTGCTTCTCAAAGAGAAGCAGAATTAAATTCAAAACTGGTAGACTATGAACAAACACTCAATGATAGAAATGTGCTGAATGAGAAGGTTGCAGAACTTGAGAAAGAGTTGCAACTTGCACGGGATACTCTTGCTAACCAGAAAGGAGCAGAATCTCAGAAGTTGGAACTAGAGACAGCCCTGAAGAATTCTGTTGAAGAACTTGAAATTAAGAAAAAAGATATCTCTCTTCTACAGAAACAAGTGGCAGATCTAGAGCAGAAATTGCAACTGGCTAGTGAAAAATCCCCAGTTAAGGGCGATGAGGGTGTTGATCAGAAAGAAGGGTTGGAAGTCAAGTCCAGGGACATTGGATCAATCCTCTCGAGTCCATCGAAAAGAAAAAGCAAGAAAAAGTCAGAAGTACCAAGTCCTCAAACATCATCTGCGTCCGAGACTCATGTTCAAAGTGACCAGGGTTCGTCTGTCATAAATTACAAGTTCATCTTTGGAGTAGCTATTGTGTCCATTGTCTTTGGCATAATTCTTGGGAAGCGTTACTAG 4005 0.401 MEEETKVVSEVVVEADHKNDAIKETNGGLSSEVKKEEEENALDGEFIKVEKEENATDDKSHKTERSSDSPSREFLEAQEKIRELDVELQRLTESLKTSEHENIQLRGEISVTQQKLEESGKKYEELELSHKKLQEQTVEAENKYNQQLSNLEEALQSQEVKQKELLHVKEAFDDINLELENSRKKMQELQDELKLSADEARKFEELHKQSGSHAESEGKKALEFERLLEEAKLTAKGMEDEMASLKEELKGVYDKISENQKIEEALKTTTAELSTIQEELTLSKSQLLEVEKRLSSRDSLVDDLTREVNLIKTSETQLKEDMSALQNLLATSKEELQEKNSELETARSKLREEEKLRESIEAALKNQETQFLNVKEELTKLKTENGTLEATVEDLTLNSKKFEELCADLEGKLKLSDENFLRTDSLLSQALSNNAELELKVKSLEDLHNESGAAAATATQRSLELEGHIQTSVEAAEVAKSQLRDLETRFIAAEQKNVELEQQLNLLQLKTSDADREVTELSEKISHLNAKLEETEKEKNLLNDQLQEYMEKVVQLESDLNQSSLRSSILEEELKKVNDKCSEHEDRATMNHQRSRELEDLIQSSNSKLEDSGKKVSELELLLAAEKYRIQELDQQISTLEDKSRVSDEQNNKYLNDLSNLTSNLEAIQTRTSTLEVTLQAANERGKELEDSLNSMTDEKKKLEDASSSLNEKLAEKENLLEILRDDLNQTQGKLQSTESDLRAAELRESDIIEKLKASEENLVIRGRDIEETATRHSELQLLHESLTRDAEQKLQEAVENFSNKDSEVQSLLEKIKILEELITRGGEQSTSLKNQLEESLSKLSSLESENEVLKRQVLEAESKISQSFSQNELLVGTNIDLRTKIDELEESLNRALSEKDDTNQELVAHKNSLAELNDLQSKSTQIQSANESRILEVESQLQEALQRHTEKESETKVLNEKLNTLENQIKLFEEQALNAVVASGTQKDELEESLIKLKHLQTVIEELQNKSLHHEKETSGLNYENSKLNEEIAIYESKLSDLQSKLSAALAEKDETVKEILTSKNAIEELVSKHSAEVQTLNSQLSSVIDEKNLLNETNQDIKKELQSFILDLEEKLKEQQKIEGSLRYEIEILKMEIAEKSELNEEVGSVQAAASQREAELNSKLVDYEQTLNDRNVLNEKVAELEKELQLARDTLANQKGAESQKLELETALKNSVEELEIKKKDISLLQKQVADLEQKLQLASEKSPVKGDEGVDQKEGLEVKSRDIGSILSSPSKRKSKKKSEVPSPQTSSASETHVQSDQGSSVINYKFIFGVAIVSIVFGIILGKRY 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01674 1334 Coils Coil 221 255 - -
Vian5g01674 1334 MobiDBLite consensus disorder prediction 18 74 - -
Vian5g01674 1334 Coils Coil 315 412 - -
Vian5g01674 1334 Coils Coil 1065 1124 - -
Vian5g01674 1334 PANTHER EARLY ENDOSOME ANTIGEN 1 1334 - -
Vian5g01674 1334 SUPERFAMILY Tropomyosin 602 846 - -
Vian5g01674 1334 SUPERFAMILY Tropomyosin 215 414 - -
Vian5g01674 1334 Coils Coil 116 168 - -
Vian5g01674 1334 Coils Coil 679 762 - -
Vian5g01674 1334 Coils Coil 74 108 - -
Vian5g01674 1334 Coils Coil 830 864 - -
Vian5g01674 1334 SUPERFAMILY Tropomyosin 429 604 - -
Vian5g01674 1334 Coils Coil 1215 1249 - -
Vian5g01674 1334 Coils Coil 616 671 - -
Vian5g01674 1334 Coils Coil 476 587 - -
Vian5g01674 1334 MobiDBLite consensus disorder prediction 1274 1303 - -
Vian5g01674 1334 Coils Coil 1170 1204 - -
Vian5g01674 1334 Coils Coil 879 920 - -
Vian5g01674 1334 Coils Coil 427 447 - -
Vian5g01674 1334 Coils Coil 259 279 - -
Vian5g01674 1334 Coils Coil 1026 1060 - -
Vian5g01674 1334 Coils Coil 991 1018 - -
Vian5g01674 1334 Coils Coil 19 39 - -
Vian5g01674 1334 Coils Coil 935 976 - -
Vian5g01674 1334 MobiDBLite consensus disorder prediction 1289 1303 - -
Vian5g01674 1334 Coils Coil 172 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01674 Vian-Chr5 39155565 39161321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01674 - K20283 gmx:100801514 1989.93