Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01668 ATGAGGGTATATAACATAACTTCACAGCCAAATAACTCATTGCCAGTAGAAAGAGCTTTGAGAAGAAACATGGGAGAAGTGGCCGAAGCTCAATACTTCAGATCAGAAATAGCTCTTCTGAATTACTCAGATGCCACTCTGAAACCCCCACTCTCTCCTCTCTTGATCCACATTGATCCACTCACACCAAGTGATTCATCTCCCTCACAAGCTCATCCTTCACCCTCTTCCCACCAACAGGAACGACACCCCAAAGACGCATGGCTTCCCATCACTGAATCAAGAAATGGAAATTCCTTTTCTGCAGCCTTCCATGTTCTTAACTCCAATATCGGCTTCCAGGCTCTCATGCTTCCCGTTGCTTTCGCCACTCTTGGTTGGGTGTGGGGCACAGTATGTTTGACAGTGGCATTCATTTGGCAGCTCTATAGCATATTTCTTCTTGTTGAACTTCACGAATCCGTCCCTGGGATTCGTCACAGCAGATATCTCTTCCTCGCCATGGCTGCATTCGGTAAAAGGTTAGGGAAAGTTGCAGCATTATTCCCAGTGATGTATCTTTCAGGAGGCACATGCGTCATGCTTATCATCACCGGTGGTGGGACCCTGAAACTGTTATTCAAGACACTTTGCGAGAATGATAATGGAAACACTTGCAATGCCCACGCGCTTACCGGAGCAGAGTGGTTCTTGGTCTTTACCTGTGCCGCCATTCTCATTGCACAGTTGCCAAACCTCAACTCCATGGCCATGGTTTCTCTCGTCGGAGCCGTTACCGCCATCTCTTATTGCACCCTCTTCTGGGTTCTCTCCGTTAAGAAGGGTAGGCCCAACAACGTATCGTATACCTCGACCCTGTCGGAAGAATCCACTGCGGTGGCTAAGATCAGCGACGTTCTCAATGCTATTGGAATCATCGTGCTAGCCTACAGAGGTCATAATGTTTTGCTCGAGATACAGGGGACGCTGCCTTCAGATTTCGATAGAACATCCAAAGAACCAATGCGCAGAGGAGTGAGCATGTCATATGTTCTGATCTCCATGTGCGTCTTTCCTCTTGCAATTGCCGGATTCTGGGCCTATGGAAGCCAGATAAACGACGGTGGATTGTTGTATTCGTTCCCGCAACTCCACAGGAAGCAGATAACGAAATTCTCTATGGGAGCAATATACGTTCTGGTGATAATACATTGTTTGAGCAGCTACCAAATCTATGCGATGCCGGTTTTCGACAACCTTGAGATAAGATTGACGAGCATAACGAATGAGAGATGTTCGGGATTGGCGAGAACATGCATACGATTATTTTTCGGGGGATTGACGTTTTTCATATCTGTCGCATTCCCATTCCTTCCATCCCTATCAGTACTGCTTGGAAGCATGACCCTGGTGCCGATCACGTATTCATACCCCTGTTTCATGTTTCTATCACTGAAGAAGCCTCGACCAAGAGGTTTTGTATGGTGCTTCAACGCTGCGCTCGGGTGCTTGGGGTTGCTTCTCAGTGCTCTTCTCTTAGCTGCAGCTGCAAGAACTCTGTCTCACAAAGGCTTGAATGCTAACTTTTTCAGACCATAA 1578 0.4721 MRVYNITSQPNNSLPVERALRRNMGEVAEAQYFRSEIALLNYSDATLKPPLSPLLIHIDPLTPSDSSPSQAHPSPSSHQQERHPKDAWLPITESRNGNSFSAAFHVLNSNIGFQALMLPVAFATLGWVWGTVCLTVAFIWQLYSIFLLVELHESVPGIRHSRYLFLAMAAFGKRLGKVAALFPVMYLSGGTCVMLIITGGGTLKLLFKTLCENDNGNTCNAHALTGAEWFLVFTCAAILIAQLPNLNSMAMVSLVGAVTAISYCTLFWVLSVKKGRPNNVSYTSTLSEESTAVAKISDVLNAIGIIVLAYRGHNVLLEIQGTLPSDFDRTSKEPMRRGVSMSYVLISMCVFPLAIAGFWAYGSQINDGGLLYSFPQLHRKQITKFSMGAIYVLVIIHCLSSYQIYAMPVFDNLEIRLTSITNERCSGLARTCIRLFFGGLTFFISVAFPFLPSLSVLLGSMTLVPITYSYPCFMFLSLKKPRPRGFVWCFNAALGCLGLLLSALLLAAAARTLSHKGLNANFFRP 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01668 525 MobiDBLite consensus disorder prediction 63 84 - -
Vian5g01668 525 PANTHER OS05G0424000 PROTEIN-RELATED 86 495 - -
Vian5g01668 525 MobiDBLite consensus disorder prediction 63 77 - -
Vian5g01668 525 Pfam Transmembrane amino acid transporter protein 97 508 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01668 Vian-Chr5 39091914 39094943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01668 78 525 Organic Solute Cotransporters AT1G47670 50.223 2.67e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01668 K26385 - gmx:100793408 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01668 5 39091914 39094943 Vian5g01668 5 39091914 39094943 ECH