Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01665 ATGAAGCTCATGAATAAACCATCACAGCTACGTGCTTTATCCTGTTTCTGTTCCATTCTGCTGCTTTTGGAATTCGTTTTCGTTGCTGCGGAAGATCCTTATAGATTCTTCGACTGGACCGTCACCTACGGTGACATTTATCCTCTAGGGGTTAAACAGCAGGGTATTTTGATCAATGGCCAATTCCCAGGCCCTGAAATCTATTCTGTTACCAATGACAATTTGATCATTAACGTACGCAATAACTTGACCGAGCCGTTTCTTCTTTCATGGAATGGTGTTCAACAAAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACGACATGCCCCATCCCTCCAGGGCAGAATTTCACCTACACACTTCAAGTCAAAGATCAGATTGGAAGTTTCTTCTATTTCCCATCTCTTGCTTTCCACAAGGCAGCTGGTGGTTTTGGAGCAATCAAAATCCTTAGCAGACCAAGAATCCCTGTCCCATTTCCTGAACCAGCTGCTGATTACAGTCTTCTTATTGGTGATTGGTACCAAATCGATCACAAGAAACTTCAAGGTGTTCTAGATTTTGGACATAGACTTCCGTTGCCTCAAGCTGTTCTTATCAACGGTCGTCCAAACGGCACAACATTCACAATCGAACAAGGGAAGACATACAGGCTTAGAATATCAAATGTTGGACTTGAAAACACTCTCAACTTCAGGATTGAAGGCCACAGCATGAAGTTGGTGGAAGTTGAGGGAACTCACACCATCCAAACCGAGTATTCCTCGTTAGATGTTCATGTGGGACAGTCTTATTCTGTGCTTATCACAGCCGATCAAGCGCCCAAGGACTACTACATTGCAGTGTCCACTCGTTTCACTGACAAAATAATCACGAGCACTGCCATCCTTCACTACAGTAACTCCCAACAATCTGTTTCTGGCACAATCCCTGGTGGCCCAACCGATCAGATCAATTGGTCCATCGAACAAGCTCGTTCGATCAGGACAAACTTGACAGCAAGTGGACCAAGGCCAAATCCTCAAGGCTCTTACCATTACGGTTTGATTAACATCAGTAGGACAATTACATTGTCGAGCTCAGCGGCACAAGTCAATAAGAAACAGAGATATGCAGTGAACAGTGTGTCGTTCGTACCAGCTGACACTCCTTTGAAGCTCGCCGATTACTTCAAGATTGGTGGGGTTTTCAAAGTTGGAAGCATTCCCGATACCCCTTCTCGTAAACCCATGTATCTTAACACCTCAGTCATGGGTGCCGATTTTCGAGCATTCGTTGAGATCGTGTTTCAGAACAACGAGAACATTGTCCAGAGCTGGCACATCGATGGATACTCCTTCTGGGTTGTAGGAATGGATGGTGGTGTGTGGACACCTAAAAGTCGAAACGAGTACAACCTCAGAGATGCAGTGTCAAGGAGCACGACACAGGTGTATCCCAAGTCATGGACTGCAATTTACATGGCACTGGATAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGGCACGACGATACCTTGGACAGCAATTTTATCTGCGAGTGTATTCGCCAGTTGGATCCGTCAGGGATGAATACCCAATTCCCAAAAATGCTCTTCTTTGTGGCAAAGCAGCAGGAAGAACAAGTAGATGA 1641 0.4485 MKLMNKPSQLRALSCFCSILLLLEFVFVAAEDPYRFFDWTVTYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVRNNLTEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGQNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPEPAADYSLLIGDWYQIDHKKLQGVLDFGHRLPLPQAVLINGRPNGTTFTIEQGKTYRLRISNVGLENTLNFRIEGHSMKLVEVEGTHTIQTEYSSLDVHVGQSYSVLITADQAPKDYYIAVSTRFTDKIITSTAILHYSNSQQSVSGTIPGGPTDQINWSIEQARSIRTNLTASGPRPNPQGSYHYGLINISRTITLSSSAAQVNKKQRYAVNSVSFVPADTPLKLADYFKIGGVFKVGSIPDTPSRKPMYLNTSVMGADFRAFVEIVFQNNENIVQSWHIDGYSFWVVGMDGGVWTPKSRNEYNLRDAVSRSTTQVYPKSWTAIYMALDNVGMWNVRSEFWARRYLGQQFYLRVYSPVGSVRDEYPIPKNALLCGKAAGRTSR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01665 546 SUPERFAMILY Cupredoxins 161 340 IPR008972 -
Vian5g01665 546 SUPERFAMILY Cupredoxins 27 181 IPR008972 -
Vian5g01665 546 Gene3D - 349 544 IPR008972 -
Vian5g01665 546 Pfam Multicopper oxidase 384 519 IPR011706 GO:0005507|GO:0016491
Vian5g01665 546 Pfam Multicopper oxidase 41 154 IPR011707 GO:0005507
Vian5g01665 546 FunFam Monocopper oxidase-like protein 350 546 - -
Vian5g01665 546 CDD CuRO_1_AAO_like_1 36 151 IPR034273 GO:0005507
Vian5g01665 546 Gene3D - 165 338 IPR008972 -
Vian5g01665 546 CDD CuRO_3_AAO_like_1 381 502 IPR034275 GO:0005507
Vian5g01665 546 Gene3D - 34 155 IPR008972 -
Vian5g01665 546 FunFam L-ascorbate oxidase homolog 34 155 - -
Vian5g01665 546 FunFam Monocopper oxidase-like protein 165 338 - -
Vian5g01665 546 Pfam Multicopper oxidase 167 302 IPR001117 -
Vian5g01665 546 PANTHER MULTI-COPPER OXIDASE 53 513 IPR045087 -
Vian5g01665 546 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01665 Vian-Chr5 39073820 39077146 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01665 - - gmx:100818914 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01665 5 39073820 39077146 Vian5g01665 5 39073820 39077146 ECH