Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01664 ATGGGGAGCGTTTCGTCTGAAGACGGTTCCGACCAGCAGAGCGACCGCTGCGGCAGCTACAGCCTCAGCGCTGACGTCAGCGAGTCCGAGAGCTGCGGAAGCTTCTCCGCCCGCCGCTTCGACGCCGAGGGAGCTTCCAGCTCGGCCAACCTCTCGCCGCGTCCCCTCGCGTCTCACTTCAACTTCCCGCCTCCGCAGGTAATGCTTCCCGTTATTGGCGGCAAGGACGTCGTCGTTTGGGATCACAAGCGCGACCTCGATCTGTCGGAAGTGGAAATGATGAAGGAGCGGTTCGCTAAGCTGCTTCTCGGAGAAGACATGTCTGGTGGTGGAAAGGGAGTGTGCACTGCGCTTGCTATCTCCAATGCTATAACTAATCTCTCTGCAACTGTGTTTGGCGAACTGTGGAGGTTGGAGCCGCTGGCACCGCAGAAGAAGGCAATGTGGCGTAGGGAAATGGAGTGGCTGCTGTGTGTTAGTGATTCCATCGTGGAGCTGGTGCCATCTGTGCAGCAGTTTCCTGGGGGTGGAACCTACGAGGTGATGGCGACGCGTCCTCGCTCGGATTTGTACATCAATCTTCCGGCTCTGAAGAAGCTTGATGGGATGCTGCTCGGTATGCTTGACGGGTTTCATGACACGCAATTTTGGTATGTTGACCGGGGAATCATATTGGCTGATTCCAAGGATTGTGATGCCTACGGTAGACCATCGGTTAGGCAGGAGGAGAAATGGTGGCTTCCCTCTCCCAAGTTACCCCCAAATGGCTTGTCCGAGGAAAATAGGAAAAGGTTACAGCAATGCAGGGATTGCACTAATCAGATACTAAAAGCTGCTGTCGCAATTAATACTTCTGTGATTGCTGAAATGGAAATTCCCGGCGCATATGTAGAGTCCTTGCCCAAGAATGGTAAGGCTTGTCTCGGGGATATAATTTATCGATACATAACGGCAGACCAGTTCTCGCCTGAATGTCTCCTTGATTGTTTGGATCTTTCGTCAGAGCATCACACTCTGGATATAGCTAATAGAATTGAGGCTGCCATACATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAGTTCAGCAAAAGCCAGACGGTCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACAGTGAAAAAAACAAGAATCATTTTCTTGCACAACGGGCAGAGACACTTCTAGAAAGCTTGAAACACCGATTTCCAGGGCTCCCTCAGACTGCACTCGATATGGCCAAAATTCAATATAATAAGGATGTCGGGCAGTCTATTCTTGAAAGTTATTCACGAGTGATGGAGAGCTTGGCCTTTAACATTATGGCCAGGATTGATGATGTCCTTTATGTAGATGATAGTATAAAGCGATGTGCGGCTGCAGATTCTCTCTCATTGTTCAGCAGGGGAGGTTTTGGTGGCATGCCCATCCAGAAGAGATTCTCTCCTAGTCCCTTCTCAATTCAGCACACTCCATATGCCTCCCCATTTGCAACACCAACGTTTTGTTCCTCCTCTCCTGTTACTGGGAGCCCGTGTAGTCCTGCAAGGATACATGATATGAAGAGAAATGCTCCTAAGGAGGGTGCAGATTCGAAGACAGACAAGTTGGCCAAATCTGAGTTTGAGAGAGTTTGGTCATATGCCGGAAACCTCAGTGCAAGAAGAGCTTCCGGTGATGCTCCAGAAAGAGACTGA 1701 0.5032 MGSVSSEDGSDQQSDRCGSYSLSADVSESESCGSFSARRFDAEGASSSANLSPRPLASHFNFPPPQVMLPVIGGKDVVVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLGMLDGFHDTQFWYVDRGIILADSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEENRKRLQQCRDCTNQILKAAVAINTSVIAEMEIPGAYVESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSEHHTLDIANRIEAAIHVWRLKDHKKHLSSAKARRSWGGKVKGLVADSEKNKNHFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPTFCSSSPVTGSPCSPARIHDMKRNAPKEGADSKTDKLAKSEFERVWSYAGNLSARRASGDAPERD 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01664 566 FunFam Rop guanine nucleotide exchange factor 14 323 462 - -
Vian5g01664 566 FunFam Rop guanine nucleotide exchange factor 1 82 322 - -
Vian5g01664 566 Gene3D PRONE domain, subdomain 1 322 463 - -
Vian5g01664 566 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 89 457 IPR005512 GO:0005085
Vian5g01664 566 Gene3D PRONE domain, subdomain 1 81 321 - -
Vian5g01664 566 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 31 489 IPR038937 GO:0005085
Vian5g01664 566 ProSiteProfiles PRONE domain profile. 81 463 IPR005512 GO:0005085
Vian5g01664 566 MobiDBLite consensus disorder prediction 1 28 - -
Vian5g01664 566 MobiDBLite consensus disorder prediction 514 537 - -
Vian5g01664 566 MobiDBLite consensus disorder prediction 521 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01664 Vian-Chr5 39065216 39068123 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01664 - - gmx:100819455 1093.57