Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01659 ATGGGAGAAGAAGGTATTTGGAAAGATGTTACAAAGCATGGGATCAACCCCGGAAAGGCTACCATATTAGCTCTTGGCAAGGCTTTCCCTCCTCAGCTTGTCATGCAAGAGTTTTTAGTTGATGGATATTTCAGGAGCACAAACTGTGACAATCCTGAGCTTAAGCAGAAGCTCACTAGACTTTGCAAAACAACTACAGTGAAAACAAGGTACGTGGTTATGTCGGAGGAAATACTGATGAAGTATCCAGAACTCGTTTCTGAAGGGATCCCTACAGTGAAGCAGCGGCTAGAGATATGTAACGAGGCAGTGACAGAAATGGCCATTGAGGCTTCACAAGCTTGCATGAAGAACTGGGGTGGATCATTATCAGACATAACACACTTGGTTTATGTCTCATCAAGTGAAGCAAGACTACCTGGCGGTGACCTTTACCTGGCGAAAGGATTAGGACTGAGCCCTGATACTCAACGAATCATGCTCTATTTCGCTGGCTGTTCAGGAGGTGTGGCTGGTCTTCGTGTTGCAAAAGACATAGCTGAGAACAACCCTGGAATTCAGGAGTTTTTGCCACATACTGAGAAGAAAATTGATGGGAGGCTGACAGAAGAGGGGATAAGCTTCAAGCTAGCAAGGGAACTTCCTCAGATAATTGAAGACTCTGTTGAAGGATTCTGTGACAGATTAATGAGTGTTGTTGGGTTCCAGAATAAGGAGTACAACAAGCTATTCTGGGCTGTCCATCCAGGGGGACCAGCTATCTTAAATCGCATTGAGAAAAGACTTGATTTGTTACCAGAGAAGCTAAGTGCAAGTAGAAGGGCTCTCATGGACTATGGCAATGCTAGCAGTAATACCATTGTGTATGTGCTGGAGTATATGATAGAGGAGGGTCTCAAGACTAGAAAAGATGGCAGAGGAGATCATGAATGGGGTTTGATTCTTGCATTTGGACCTGGAATTACATTCGAGGGAATTCTTGCCAGGAACTTGAGTGCTTTAAATGTCACATAA 1014 0.4418 MGEEGIWKDVTKHGINPGKATILALGKAFPPQLVMQEFLVDGYFRSTNCDNPELKQKLTRLCKTTTVKTRYVVMSEEILMKYPELVSEGIPTVKQRLEICNEAVTEMAIEASQACMKNWGGSLSDITHLVYVSSSEARLPGGDLYLAKGLGLSPDTQRIMLYFAGCSGGVAGLRVAKDIAENNPGIQEFLPHTEKKIDGRLTEEGISFKLARELPQIIEDSVEGFCDRLMSVVGFQNKEYNKLFWAVHPGGPAILNRIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEGLKTRKDGRGDHEWGLILAFGPGITFEGILARNLSALNVT 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01659 337 Pfam Chalcone and stilbene synthases, N-terminal domain 9 187 IPR001099 -
Vian5g01659 337 CDD CHS_like 20 327 - -
Vian5g01659 337 PIRSF PKS_III 185 333 IPR011141 GO:0009058|GO:0016747
Vian5g01659 337 PIRSF PKS_III 7 187 IPR011141 GO:0009058|GO:0016747
Vian5g01659 337 Gene3D - 187 330 IPR016039 GO:0016746
Vian5g01659 337 FunFam Chalcone synthase 2 5 194 - -
Vian5g01659 337 SUPERFAMILY Thiolase-like 187 329 IPR016039 GO:0016746
Vian5g01659 337 SUPERFAMILY Thiolase-like 16 185 IPR016039 GO:0016746
Vian5g01659 337 Gene3D - 5 186 IPR016039 GO:0016746
Vian5g01659 337 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 185 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01659 Vian-Chr5 39049323 39050877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01659 245 335 Miscellaneous Gene Families AT1G04220 35.165 2.65e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01659 - - vun:114168705 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01659 5 39049323 39050877 Vian5g01659 5 39049323 39050877 ECH