Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01655 ATGGCCTCCATCCACAAATTTTTGCTTTTCTCTCTCGCCCTTCTCCTCTTCGCTTCTCCTTTTCTCCAAGTTGCTAGGTGTCAGTCAGACTCCGATGATGCTGTGGATAACATTGAAGAATCAAGCGATATTGGCATTGTTGGGGATGATGCCCAAGACTTTGGTGATGGGACCTTGTCTTCCGCTCCAGGAATTGATACAATAAGTGTATTTCCAAAAAACAGCGCACGATTGATAACAGCTGGAGAAGAGTCAGAGCTGCTTGTTGGTGTTAAAAATGATGGGGATTCAAGCTTGAATGTTATTGCAATCAGGGCTAGTATTCACCTTCCTTTTGATCACAAGCTGCTGGTTCAAAATCTTACTACCCAGGGTTTCAATAATGGTTCTGTACCAGCCTCAGCACAGGCTACTTTCCCATATTTATTTGCAGTCAGTAAGTTCATGCAGCCTGGAAATTTTGATCTTGTGGGCACTATTATTTATGAGATAGATGATCATCCATTCCAAAGCGTCTTCTTTAATGGCACTGTTGAAGTTGCTGAAGCTGGTGGTTTTCTTAGCATGGAGTCTGTTTTTCTTGTTACACTGGGGGCTGCTCTCCTTGTCCTCCTGGGGCTATGGATTCATGGTCAAATACAACACCTTTCTAAGAAAACAAAGAGGGCTCCAAAAGTTGAAGTGGGAACAAGGTCTACAGATGCTTCAACTGATGAATGGCTACAGGTTTTTACCCGGCGCCAAGGAGCACTTTTGTGCTTCTGGTTGTCTGTGCTATTTCTGGTAGTAGGCTTCTGCTATGGTGGCGACCACACCACAGTCCAGGTAGTTGGACTCGGAGAATGCACAGACTGCAATGCTAAAAATATTAAAACTAGCCAGGCTTTCTCAGGACTACGTGCAACAGTAGAGTGCAAAGCAGCAAGTGGGGACTTTGAAAGGAGAGGGGTTGGTGAGCTTGACGAAAATGGAAACTTCAAAGTGTCCCTTCCAGATGACATTGTGAAAGCTGATGAACTCAAAGAAGAATGCTATGTTCAGTTACTCAGTGCATCAGCTGCTCCTTGTCCTTCCCATGATGGTCCTTTTAGCACCAAAATTGTTATCAAGTCAAAAGGTGTCGACAAACACACACTTGGTCCTGCTGGAAAACTCAAGTTTTCTTCAGAGACATGCGCTTCTGCTTTCTTCTGGAAGCACCACCCTCTCATTCCTAAGCTTCCTCCTCATCCACCCATCACCATCCCTCCAATAGTATTTCCACCGTTTCCACCAAAGATTTTCCATAAACATCCTCCACCTGTGTATACTCCTCCGCCTGTATATACTCCTCCTCCTGTTGAACCTTCTCCTCCTACTAAGCCTCCACCATCCCCTCCAAAACCACCAAAACCATCCCCTCCAAAGGAGCCTCCTCATCCAAAACCACCAAAACCATGTCCCCCAAAGGAGCCTCCTCACCCAAAACCACCAAAGCCTCATCCAAAACCACCAAAACCAAGTCCCCCAAAGGAGCCTCCTCATCCAAAACCACCAAAGCCATGCCCTCCAAAGGTTAAGCCTCCTCTTCCACCAAAACCAAGTCCCCCAAAGGAGCCTCCTCATCCAAAACCACCAAAGCCATGCCCTCCAAAGCCACCAAAGGTCAAGCCTCCTGTTCCACCACCGGTTAAGCCTCTCCCCCCACCGGTTCCAAAGAAGCCATGCCCACCAAAGCATCCCCTTCTTCCTCCACTCAAGCCACATCCACATCCACTTCTTCCTCCACTCAAGCCACTTCCACCTCTTCCAAAACTTCCTCCAAAGCACTTTTTCCATCACCCCAAATGGCCTCCGGCGAAGAAGTTGAAGGACAACCATGCCTGGTTCTTAGACACACTGTCGCGCTTCAAACCGCCCAATCAGAGTTCCAAGGAAGCTCTGAATTCAAAAACTCTGAAAATTGGATCTCACCAGCTCAGTGTTCAGCCTCACCTGAAAGATAAAGCGTTGCAGATTAGCTCCATCCTGCTACTAGACGAGGTTCAATCATACATTTTTGTTGAAAGGTCCATCAAACATAACGATGCAGTTGCTGATTCCATGGCTCCGGAGTTTCTTCACATGGATGTTGAGCTTTTTACACTGTGGGCTGAGGAGACTCTAATTGAAGACAACTTGGTCTTAGACATCCTTTTCCTGGCATATTATGACTCATTATGTACCTGTAGCGGGGAAATGTGGAAGAAGTTTGGTGCTCTTTACAAGGGGATCTTAGCTGGTGATTATAACTTGGGAAAGCTAGCAATTACTGCAGAAACACAACAATTGTCTTATCATGCTAAAGTTCAGCTGCTGCTTATTTTAATTGAAACCCTGAACCTGGAGAATGTTCTTCAAATGGTTCATGATGAAGTACCATATAGGAAAGGCAAGTCTACTTTTTCCATGACCGATGTCCAAGAGATGGATGCACTAGTTTCTACTTTCAATGCTTTTGAAATGAATGAAGCGGGTCCTCTAGTTCTAGCTTGGGCAGTATTTCTCTATCTGCTTTTGACACTTCTGGAAAAAGATGAAAACAATGACCTAATGGAGATTGATCACATTAGTTATGTCCGTCAAGCCTTTGAAGCTGGATCGCTGCGATATTGTCTTGAAATTCTGGAATGTGACATTTTGAAAGATTATGATGGCCCTATGTGTGGATATCGCAGTGTTTTGAGGACATTCATTTCTGCATTCATTGCATCTTATGAAATCAACCTTCAGCCTGATGACGGTAACCCCACTCTAATACTGGATATTCTATGCAAGATTTATCGTGGAGAGGAATCATTATGTATTCAGTTTTGGGACAAGGAAAGTTTTATTGATGGTCCAATTCGGTCTCTTCTTTGCAACCTAGAGAGTGAGTTTCCTTTCAGGACTGTTGAACTTGTTCAACTCCTGTCATCCCTTGGTGAAGGAACTTGGCCAGCGGAGTGTGTGTATAACTTTCTAAATAGGTCTCTTGGTATATCATCTTTGTTTGAGATTAATGGTGATTCACAGATAGTTGAAGCACAACAGGTAGTGCAAGTTCCTGGGGTTCAAGGTCTCTTTATTCCGGCTGGAACTCGTGGTCGTGTCTTGAGAGTTGTTGGAGAGAATACTGCCCTTGTTCGATGGGAGTATACATCATCTGGAATATTCGTATTACTCTTACATTTGGCCCAAGAAATGTATTTGGATAACAAGGATGAAGTTGCTGTTACACTTGACCTGCTTAGTAGATTGGTGTCCTTTAATACTGGTATTTGCTTTGCTGTGATGGACATCAGCAACTCTTTGCAATTTGATGCTGTTGGCTTGATGAATGAGCAGGTTGAAAAGAGGGTCTGGGTGGTTGAGATAATTTGCAATTTAATTAAAAAACTGCCTCTGAATTCAGGTGGTGCTGCACTTATGTCAATGGGTATCAAGATTTTATCCATTATGTTGATTTGTTCTCCATCTAACGTTGCAGCGGCTACTCTAAATGCAAACCTGTTTGATATGACTTTGCAGACACCTGTGTTGAATGTAGGAAGTAATGGCTTATCAAGCGGGTCATGGTTGCTTTCTTCTAAACTTGCTAGGATGCTTTCAATTGACTGTGAGCAGAACAGTAATGACTGCCCCTTGGCAATATCAGCTAAAGGAGCCCGGGGACCAGTCACATGTGGTATCTTTACAGACAAAGTGCTGTTTTCATATTTGGCTGTAAATCTTGGCATTCAGAAAGCATTCTATGCAGAGGCAATGGGAAGGATTGTCATAGATTTGGGTGGCATCCTAGATGGGATTGCATTGTTGCTGGACTTCACCATACAGCTTGTAGAAACAGGAGTAGAGCATGATGATCTGCTGGCATTGATAATTTTCTCTTTGCAGTATATTCTAGTCAATCACGAATATTGGAAATACAAGACGAAGCATATTAGATGGAAAATAACACTTAAGAAATTGCATGTAAGCCGCGTCTTTGATCCAATGGAAATTGAAGGATTACAGCTTGCTATAAGTTCTGTTTTAGACATTCTTTCAGTCATGTTGACCAAACTTTCCAAGGATACTTCATTGAACTTTCCAGCTTTTCTCCAAGCAGTTTTCTCTTGCACGACCAAACCGGTCCCTGTTGTCACTTCTGTCTTGTCCCTGATTTCATACTTTCAAGATCCGGCCATCCAATATGAAGCTGTTAGGTTTATTTCAATGTTATTTGCCATAGCAGATTGTATTCAACCATTTTCATATGGAATCACATGCTTCGTTCCTGATAATGAGATCATGGATTTGAGGCAATCTCTGAGCTACATACTTCTTGAGCAATCAGTGTCAAATGAAGATCTATTTGTTGCCACTGTTAATCTGTTTACTTCTGCTGCACATTACCAGCCTTCTTTCATTGTTGCTATCTTTGCTCCAGAGGAGAACACGAAAGACCACTTGAGCATTGGTGATGCAAAGCTGCAAAAGGAGGAAACCTCTCCTATACATGCAGTTTTTAGAAAACCAAGTCTTATTGATGCACTTGTGCACTATATTGAAAGGGCGGATGATCTGATCAAGAGCAATCCCCGCATACTGCTTTGTGTACTTAACTTCATGATTGCCTTATGGCAAGGGGCTCCCCAGTATGCCAATCTCTTGGAGTCCTTAAGAAGGCATGGAAAGTTCTGGGAACACTTAGCTAATGCAATCTCAAATATTGCTAGCAGTGAAATTTCCTTGCCCACAAGCCTGAAAGAAAAAGATGCTTTCAATCTGGCATACGCTTTCCATTGCCAGTCTTCGATACTAGGAATCATGGCATATGAACTATTCTTGCAGAGAAAGTTGTTTCATGCAGAGTCAACTGTGAAGGATGCAGCAGAATCTAAGGAGAAGGAGCAAAATGTCACAAGAACTGAGAAATCTAAAGCGACGAATCTTCATGATCTTAAGGGAATCTGGTCTTCATTGTTCAATGATTCCATTTTAGAGAAACTAATAAAGTCATACACTTCTTATGGAAATAATAGTGATATATATAATGGTGCAAAGGTGGCCACCAGTTTATTCTCTGTTCATGTGATGATGAAATTAGCAGTTTGCGACTCTGGAAGTTTATCTGTGTTATTGCTTCAGAAGATTCATGAAATTCTGGCTAAGTTGAGCATTCATCCTGCTTTTTCTGAATTGCTGTCTCAGTATTCACAACGTGGTTACAGTGAAGGTAAGGAACTAAAGAAATTGATACTCAGTGACCTCTATTATCATTTGCAAGGAGAGCTTGAAGGGAGAAAAATTGGTATTGGACCATTCAAAGAATTATCTCAGTATCTTGTCGAATCAAATTTTTTGGGAACCTATCAACACCAGTTCAATGAAGATGCTTTTACAAAGAATATGTTTACGAAGAATGTATACTTGTTTGACCTTGCTCACTTGCGAGAAGATTTGAGATTAGATGTGTGGGATTGTAACAATTGGAGAATATCCAAGGAGGTTGCAGAAGTCATGTTGCGTTTCCTGCAGGATGCAAACTCAGTCATGTTGCTTTCAAGTTCAAAGCTTTCTGCATTAAAAGGACTGATAGCTGTTTTGGCTGTCAACCATGATTCACAAGGGAGGGCTACAGCTGGAGGGAGGATCTCAGATGAACTCATATTTACTTTCATGGATAATATATGCCAATCTTTCCTTTCTAACGTGGAGATATTATCATCTGTTCTAGATGCCTCTGAGGATATTCTCAATTTTCTTGCATGTGAAGTAGAACTAATCTTCCAGTTGACAAGAACTGTCAGGAAAAGCCTCTCGCTAGATGTATCCCTACTTGTTTTGAAATGTGCTAGTTCGGGTCTTAGACTATTGGGTTCACTTAAGCCGGCACCTTCTGAGGCTAATGTGATTATGAAACTTTTACTCACATTGCTGCTTTCAGTATTACAGTCCAACTCCCTTAATGCACATTCAGGTGTGGTAACCAAGGACAATTCTGGTGAGGTCTTATCAAAGATTTCAAATGCAACCCTGGGTCTACTACCCATTCTTTGCAACTGTGTTGCGACTTCTGATCATTGCATGCTATCCCTGTCAGTCATGGATTTAATACTGAGAAGCTTCTTGACACCCAGGACTTGGTTACCTGTCCTGCAGAATCATCTCCAATTGCCAGTAGTTATGCTTAAACTCCACGATAGAAGTTCAACTTCTATTCCAGTAATAATGAAGTTCTTTTTGACCCTTGCACGAGTTAGAGGAGGTGCTGATATGCTTTATTGTTCCGGCTTTTTGTCGTCTGTGAGAGTGTTATTTGCTGAATCTGGTGAGGATTTCTCGACCACTAGTGAGAATCTCGGGGGCTCGTGCGAGAAGTTTGTAATACCCCAGGATATTTGGGGGCTTGGATTAGCTGTGGTTACAGCTATGGTTAAATCCTTGGGAGACCATTCTTCTGGAACTGCTATTGTGGATAGCATGATACCTTACTTTTTTTCAGAGAAAGCTCATTTTATCATTTATTCTCTAAATGCCCCAGACTTTCCTTCTGATGATCGTGACAAGAAAAGACCTCGAGCACAGAGGACATTTATATCTTTAGCTACTCTTAAAGAAACAGAACATACTTTAATGCTCATGTGTGAGCTAGCAAAACATTGGCATTCGTGGATTAAGGCAATACGAAATGTGGATAGACAGCTTAGAGAGAAGTGTATCCATCTTTTAGCCTTCATTAGCAGGGGATCTCAACGCCTTGGTGAATTGTCAAGCAGGAACGCCCCACTTTTATGTCCACCTACCCTGAAAGAGGATTTTGAAATTTCCTCAAAACCTTCCTTTGTCAATAGCAAAAATGGATGGTTTGCTCTTTCCCCACTTGGATGTGTGCCAAAACCAAAGTTCTCTTCTTTCTCAACCACTCCTACCCATGGCCAAGCAACTGAGAGTACTGATCTTATTCCGAAAACATGCTTTTCTGATACTGTAGCCCTGCAGGTATATAGAATAGCATTTCTTCTTTTAAAGTTTCTCTGTTTACAAACTGAGGGTGCTGCTAAAAGGGCTGAGGAGGTTGGGTTTGTTGATCTTGCTCGTTTTCCTGAGCTGCCAATGCCAGAAATCTTGCATGGATTACAGGATCAAGCTATTGCCATTACTACGGAACTCTGTCAAGCCAACAAACAAAGGGTCTCTCCAGAAATACAGGATGTTTGCAACTTACTGATGCAAATACTTGAAATGGCCTTGCACTTGGAACTTTGTGTTCTACAAATTTGTCGCATAAGACCTGTATCGGGGCGTGTGGAGGATTTCTCAAAGGAAGCAAAATCTCTGTTTAGTGCACTGGAGGGTCATGCTTTTCTAAAAGCATCTCGCAACTCTCTGAAACAGATGATATCGTGGAGGGTCCCTGCTCCGTGCCACGGTGAGTCGGTGATTATGCCCAATGCTGTCTCGGTTCCGCTTGATCAGGACCTATAG 7470 0.4245 MASIHKFLLFSLALLLFASPFLQVARCQSDSDDAVDNIEESSDIGIVGDDAQDFGDGTLSSAPGIDTISVFPKNSARLITAGEESELLVGVKNDGDSSLNVIAIRASIHLPFDHKLLVQNLTTQGFNNGSVPASAQATFPYLFAVSKFMQPGNFDLVGTIIYEIDDHPFQSVFFNGTVEVAEAGGFLSMESVFLVTLGAALLVLLGLWIHGQIQHLSKKTKRAPKVEVGTRSTDASTDEWLQVFTRRQGALLCFWLSVLFLVVGFCYGGDHTTVQVVGLGECTDCNAKNIKTSQAFSGLRATVECKAASGDFERRGVGELDENGNFKVSLPDDIVKADELKEECYVQLLSASAAPCPSHDGPFSTKIVIKSKGVDKHTLGPAGKLKFSSETCASAFFWKHHPLIPKLPPHPPITIPPIVFPPFPPKIFHKHPPPVYTPPPVYTPPPVEPSPPTKPPPSPPKPPKPSPPKEPPHPKPPKPCPPKEPPHPKPPKPHPKPPKPSPPKEPPHPKPPKPCPPKVKPPLPPKPSPPKEPPHPKPPKPCPPKPPKVKPPVPPPVKPLPPPVPKKPCPPKHPLLPPLKPHPHPLLPPLKPLPPLPKLPPKHFFHHPKWPPAKKLKDNHAWFLDTLSRFKPPNQSSKEALNSKTLKIGSHQLSVQPHLKDKALQISSILLLDEVQSYIFVERSIKHNDAVADSMAPEFLHMDVELFTLWAEETLIEDNLVLDILFLAYYDSLCTCSGEMWKKFGALYKGILAGDYNLGKLAITAETQQLSYHAKVQLLLILIETLNLENVLQMVHDEVPYRKGKSTFSMTDVQEMDALVSTFNAFEMNEAGPLVLAWAVFLYLLLTLLEKDENNDLMEIDHISYVRQAFEAGSLRYCLEILECDILKDYDGPMCGYRSVLRTFISAFIASYEINLQPDDGNPTLILDILCKIYRGEESLCIQFWDKESFIDGPIRSLLCNLESEFPFRTVELVQLLSSLGEGTWPAECVYNFLNRSLGISSLFEINGDSQIVEAQQVVQVPGVQGLFIPAGTRGRVLRVVGENTALVRWEYTSSGIFVLLLHLAQEMYLDNKDEVAVTLDLLSRLVSFNTGICFAVMDISNSLQFDAVGLMNEQVEKRVWVVEIICNLIKKLPLNSGGAALMSMGIKILSIMLICSPSNVAAATLNANLFDMTLQTPVLNVGSNGLSSGSWLLSSKLARMLSIDCEQNSNDCPLAISAKGARGPVTCGIFTDKVLFSYLAVNLGIQKAFYAEAMGRIVIDLGGILDGIALLLDFTIQLVETGVEHDDLLALIIFSLQYILVNHEYWKYKTKHIRWKITLKKLHVSRVFDPMEIEGLQLAISSVLDILSVMLTKLSKDTSLNFPAFLQAVFSCTTKPVPVVTSVLSLISYFQDPAIQYEAVRFISMLFAIADCIQPFSYGITCFVPDNEIMDLRQSLSYILLEQSVSNEDLFVATVNLFTSAAHYQPSFIVAIFAPEENTKDHLSIGDAKLQKEETSPIHAVFRKPSLIDALVHYIERADDLIKSNPRILLCVLNFMIALWQGAPQYANLLESLRRHGKFWEHLANAISNIASSEISLPTSLKEKDAFNLAYAFHCQSSILGIMAYELFLQRKLFHAESTVKDAAESKEKEQNVTRTEKSKATNLHDLKGIWSSLFNDSILEKLIKSYTSYGNNSDIYNGAKVATSLFSVHVMMKLAVCDSGSLSVLLLQKIHEILAKLSIHPAFSELLSQYSQRGYSEGKELKKLILSDLYYHLQGELEGRKIGIGPFKELSQYLVESNFLGTYQHQFNEDAFTKNMFTKNVYLFDLAHLREDLRLDVWDCNNWRISKEVAEVMLRFLQDANSVMLLSSSKLSALKGLIAVLAVNHDSQGRATAGGRISDELIFTFMDNICQSFLSNVEILSSVLDASEDILNFLACEVELIFQLTRTVRKSLSLDVSLLVLKCASSGLRLLGSLKPAPSEANVIMKLLLTLLLSVLQSNSLNAHSGVVTKDNSGEVLSKISNATLGLLPILCNCVATSDHCMLSLSVMDLILRSFLTPRTWLPVLQNHLQLPVVMLKLHDRSSTSIPVIMKFFLTLARVRGGADMLYCSGFLSSVRVLFAESGEDFSTTSENLGGSCEKFVIPQDIWGLGLAVVTAMVKSLGDHSSGTAIVDSMIPYFFSEKAHFIIYSLNAPDFPSDDRDKKRPRAQRTFISLATLKETEHTLMLMCELAKHWHSWIKAIRNVDRQLREKCIHLLAFISRGSQRLGELSSRNAPLLCPPTLKEDFEISSKPSFVNSKNGWFALSPLGCVPKPKFSSFSTTPTHGQATESTDLIPKTCFSDTVALQVYRIAFLLLKFLCLQTEGAAKRAEEVGFVDLARFPELPMPEILHGLQDQAIAITTELCQANKQRVSPEIQDVCNLLMQILEMALHLELCVLQICRIRPVSGRVEDFSKEAKSLFSALEGHAFLKASRNSLKQMISWRVPAPCHGESVIMPNAVSVPLDQDL 2489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01655 2489 MobiDBLite consensus disorder prediction 445 594 - -
Vian5g01655 2489 MobiDBLite consensus disorder prediction 504 594 - -
Vian5g01655 2489 MobiDBLite consensus disorder prediction 445 475 - -
Vian5g01655 2489 MobiDBLite consensus disorder prediction 476 491 - -
Vian5g01655 2489 Pfam Translocon-associated protein (TRAP), alpha subunit 8 241 IPR005595 GO:0005789
Vian5g01655 2489 PRINTS Proline rich extensin signature 437 449 - -
Vian5g01655 2489 PRINTS Proline rich extensin signature 451 472 - -
Vian5g01655 2489 PRINTS Proline rich extensin signature 409 425 - -
Vian5g01655 2489 PRINTS Proline rich extensin signature 475 491 - -
Vian5g01655 2489 PANTHER NUCLEOPORIN NUP188 HOMOLOG 1319 2467 IPR044840 GO:0017056
Vian5g01655 2489 Pfam Pollen protein Ole e 1 like 276 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01655 Vian-Chr5 38995968 39030142 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01655 K14311 - gmx:100796560 2833.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01655 5 38995968 39030142 Vian5g01655 5 38995968 39030142 ECH