Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01653 ATGGAACTGACATGGTTGAGTGCCATTCTGGTGGGAGCTGGTTATCTTGCTTTGGGTTACTTCATTGGTTCTCAGTATCCTCCTCGTTTCATTTTCTCACGTAAATTATTGACGAAAGACAACGATGCTACACTTTTCAACGATACCAACAATAAGAGAAATAGTAAGTCCAAACTCAAAGACCCTCTTCAGATTGAACAACTAGCTGACATTCTCGATGATTTTAAGATGATTCTCGTTGTCAGAAATGATCTTAAAATGGGCAAAGGGAAGATTGCTGCTCAGTGCAGTCATGCAACGTTGGGTCTCTATAAAAAGCTCCTTCATCGAGCACCAAAGGCGTTGAATAGGTGGGAGATGTCTGCGCAGCCAAAGGTTGTTGTCAAAATTGAAAGTGAAGAAGATATGCTTGCTATGCAGGAAAGGGCTAAATCTCTGAAGTTACCCACCCATATCACAATTGATGCTGGGAGAACACAGATTGCACCAAATTCCAGAACAGTGATGGCAATTCTTGGACCCGTTGAGGTAGTAGATGAGGTAACAGGTGGACTTAAACTACTATAG 567 0.4198 MELTWLSAILVGAGYLALGYFIGSQYPPRFIFSRKLLTKDNDATLFNDTNNKRNSKSKLKDPLQIEQLADILDDFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMSAQPKVVVKIESEEDMLAMQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKLL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01653 188 CDD PTH2 75 188 IPR002833 GO:0004045
Vian5g01653 188 PANTHER PEPTIDYL-TRNA HYDROLASE 2 10 188 IPR002833 GO:0004045
Vian5g01653 188 Gene3D Bit1 73 188 IPR023476 -
Vian5g01653 188 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 73 188 - -
Vian5g01653 188 Pfam Peptidyl-tRNA hydrolase PTH2 75 188 IPR002833 GO:0004045
Vian5g01653 188 NCBIfam aminoacyl-tRNA hydrolase 76 188 IPR002833 GO:0004045
Vian5g01653 188 SUPERFAMILY Peptidyl-tRNA hydrolase II 73 188 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01653 Vian-Chr5 38985716 38988900 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01653 K04794 - gmx:102664938 334.724