Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01631 ATGGCTCCCGGGCGTCGACGCGGAGCAAACAAAGCGAAGGCAAATGGCCACTTGAGTTTGGGCGATCTTGTGCTTGCTAAGGTCAAGGGCTTCCCCGCGTGGCCTGCTAAGATAAGCAGGCCTGAGGATTGGGAGAAAATCCCTGATCCAAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATTGCTTTTGTTGCCCCAGCAGATATTCAGGCATTTACCAGTGAGGCTAAAAATAAGCTGTCAGCTCGTCTTCAAGGCAAGACTAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATGCAGAAACAGAAGGCTAGTGGTTTGACAGATGACACTGACGATTCTCGTATTGGTTCAGAGGCTCCTTCCAATGATGGGGTAGTAGTTAACCTTAAGGATGCAATTGACACTATGTTATCAAATGCAGAACAAGATAACATAGATATGGAGAATATTGGTTCTAATCTAGAGCACTGTACACCTAGAGTAGGGCAAAATGACAGCCAAGATGAAGAACATTCTGTATCTGACCATCCAAACGAAAGTTCTTCTGTCTCATCACCAGTGATCAAAAGTAAATTATCCATGGGTTCAGAGCCAAAGAAGAATGGTAACAAATCAAGTCTTAAAGTTGCAAGTAATGTTAATGATTTTGGGCAAAATGATAACAGACACGGTGGTTTAGCAAATGGGACCAAGCCAAGAAAGCTTGTCAATGGTTCGCGAAAGAGAAGTGAAGCTGCAGGTGATAGAGATAGAAATGGTGGATCATCTACTGGAATTTTTAAGGCGGAAAATTGTACTGATCGTGGTGACCTTTCTAGGTCCAGAGAAACAATGAAAGCTGGGAAGAAAAGGAAAAATGCATTTGATGTTAAATTGGATTCTCCAGATACTTTTAAATCAGACAACAATGATAATACCGGGGAAAAAGATAGCAGTATGATAAAAGTCAAAACAAGTCTTGTGGTAAAAAATGAGTTGCCTGAGTTCTCGGTTGATTCCAAGGATGCCGATGGTAAAAGTTCTAGTTTGCGGAAGAAGATGCAACTTCATTCAACCTATACATTAGGGGCAAATGAATCTTTACATGCTACCAAGAAGCTGAAGCGCATGGATACCAAAGATGATTCAACTTTGGGATATCCTTCAAAAGTTCTGAGAAGAGCTTCACCTGGTTCTACAGTTATTGAAGAGAGACTATTTAAAAAGTCAGAATTGAAGAAGTCTACACCAAATTTGAAAACAGAAAAAAGCTTGTCATCAAGGGGTAAAATTAGTGGTGCAGTTTCTGATGATTCTGTCCATGAGCTGCTAGCAGTGACTAGACATCATATCCAGGTTCAAAAAGTTACGCCTGATTCTTCAGTCATTGCATCTGAGGAAAAGAAAGAAAGGAATTATCTTAGACTGAAAGGTGATACAAGTAATGTTATGATAAAAAAAGAAGAGAGGAAACGTAGAGCTGTTTGTCTTTTTGATGATGATGATGACGAACCTAAAACTCCTGTTCATGGAGGAGCTGGAAAAAATGTTAAATCATCTTCTGTTTCTGATGCCAAGAAGAGCAACAATGCACACTCAGAGAAGTCAGATGTTGTTCCGCTTGCTCAAGGAAGTTCTAGTGAGCGTGAGGATACCCATTTGAAAGAGCCATCATCTCAATTATATAACGACAGTTTGTCAATCAAGCAGCCTCTAAAAGAGAAAGATAGAGAGAAAGATGACGAAGTTATTCCTGTGCATATTCCTCATAGTCCTGAAAATTTAGATTTGAAGCAGCTTCCCTCCAATGCAGCAAAATTGAGCTCTACCTCCCCACTAAAATCACCTCAATTGGTACCTGCAAGTAAGCCAAGTGCTGAGCGGATTAAAGCTTCAAAGCTGTCACTTAAAGTTTCCAATAATGCTACTACTCATAAGAGGGTTGATCATGGGCTTTCAAAGTATTCACATAACCTGAGCTCTTCTCAGAATCAAGTTGCTACACATAAAAAGAAGCCTTCATTGTCGGCAGAAATTTCTAAAACTACACCTGAGACATTGCCTCAGGCAGTTGAAGTTCCTGTTTCAACAATTGGTTTTAAGGATACTGATGCTCTACATGTTGATAGATTGGAGGTAAGCACAGAAGGGAAAGGTACTATGAAGCATCTTATTGCTGCTGCCCTGGCGAAAAGGAAACAGGCTCATTCACAGTTTCCTCCCTCTGGCTTTCCCAGTGTTCAGGGGGGAACTCCTAGCCCGTCTACAGTTCAGCCATTTCTGTCTGTCTCGAGCAATTTTCTGCATGCAGACATGCAAGGAGTTTATGAGCACACATCATTGGCTTCTCCACCAGCTAAAGAACATCCTTCTGCTTCTCATAATCAACTTGATGCTGATGAAATTGAGGATAGAAGAGTTGATTCAGGGCAAAGGGGTCCAGGTGGCTCACTGAGTGGTGGTACTGAGGCTGCTGTTGCTCGGGATGCATTTGAAGGAATGATTGAAACATTGTCAAGGACCAAGGAAAGTATTGGTCGCGCAACTCGACTTGCCATTGACTGTGCCAAGTATGGCATTGCTAACGAGGTTGTTGAACTTCTCATACGAAAGCTGGAAAATGAAACTAGTTTTCATCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGCTCACATAATCAAAAAGAGGAAATTTTAGGCATTGCAGGAGCATCCTACATTCCCATTGTTCAGGCAGCATTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAGTGCCCGTGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAAGCTGTGGCTTGAGAGGAAAATTTTTCCTGAATCAGTTCTTCGTGGTTATGTGGATGATATTGGAATTTCAAATGATGATATTACAGTTAGCTTTTCTCTTAGACGTCCATCTCGGGCAGAACGAGCTGTGGATGACCCTATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGGTGCAATGATGAACAAGATAGTAATGCAACATTTCAGCTGCCTGGCTTTTTATCCTCACATGCATTTGAAGAAGATGAAGACGAATATGAAGATGATATACCAATCAAATTGTGTAAGGATACATTTGATGCATCTCCAGCAGATCCCACCCATGCCCTTGGAGAATCAGAAACCTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTAAAGGATGTGGATCGTGAGCTGGAAATGGAAGATGTTTCAGGTCATCCCAAGGATGAAAAGCCAACATTTTTTAACAGTTCTGATGAAATTGATTTGCAACTTCAGGTGTCAGATAGCAATTTGGATCTGACTCCAAGCATTTCAAACGAAATGTCAGCTACTCCTGAGGGTTCTCCTCCTTTGCCACTTGATTCACCTCCTCCACCCCCACCTTTGCCTTCATCACCACCGCCCCCTCCTCCTCCATTATCACCATCTCCTCCCCCACCCCCACCACCCCCAATGTTGCAACCCCCACCTCCTCCTTTACCACCATCAGCCCCTCCAGTGTCCTTGGTGCCTCAATTGTCGGGACCAGCTCGGCCACTTCTGTCCCAACCATTAATGCCATCTCAGTCATCACATCAGTCATCCCCACAGTTGGGGTATCAGCAGAGTGTACCTCATGACTTTAGTGGCACTAATAATGGTAACCAAATAGTTCCAATGGCTGGGAATTCATTTCCTGGAGGTCACAATAATGCAGCTGTCAAGAATGAAATATTTCCACAGCCTCCTGCTTATGCTCCAACAGCAGGTTGCAGCTCCCAGGAACCTTCTGGTTTTAACCCTTCAAGGCAATTAGAGTACGGACAGAATGATATGTATCTAAATGCTCAAGTTCCTCAACCTAACCATCAATTTCAGCAGGGCAATCCCCCATATGCACAAAGGTACACACATCCTGCCCCACCCCAAAATCCACCAAATCCGTACCCATATTCAAATCCTACAGTTCAGCAACATCTTCCACATTCATTCCATCCTCCCTTCCCTCTACCATCTCTTCCTGATGGCAGGAGACAATTTGTTGCTGATGAGCAATGGCGAATGCCATCGAGTGAATATAAAACAAACAATCAACATAGTGTATGGAGAGGGAGAAATCCATCATGTCCTGGTCCACCCTATGGGCAAGAAGTTGTTTTTGATTATGGTGATGAAGGTCATTTTCAGCCACCATTTGAAAGGACACCAGTAACCACTGTAGGTTTTCAGCGGCCAATTTCAAGCAACCTACCTGTTGCTCCAATCTCAGGACACGTTGTACCTCAGATGATGCCTTGTAGGCCGGACATTCCTTCTGTTAATTGTTGGAGACCCACTTGA 4380 0.4292 MAPGRRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKIPDPKKYFVQFFGTKEIAFVAPADIQAFTSEAKNKLSARLQGKTKYFAQAVKEICAAFDEMQKQKASGLTDDTDDSRIGSEAPSNDGVVVNLKDAIDTMLSNAEQDNIDMENIGSNLEHCTPRVGQNDSQDEEHSVSDHPNESSSVSSPVIKSKLSMGSEPKKNGNKSSLKVASNVNDFGQNDNRHGGLANGTKPRKLVNGSRKRSEAAGDRDRNGGSSTGIFKAENCTDRGDLSRSRETMKAGKKRKNAFDVKLDSPDTFKSDNNDNTGEKDSSMIKVKTSLVVKNELPEFSVDSKDADGKSSSLRKKMQLHSTYTLGANESLHATKKLKRMDTKDDSTLGYPSKVLRRASPGSTVIEERLFKKSELKKSTPNLKTEKSLSSRGKISGAVSDDSVHELLAVTRHHIQVQKVTPDSSVIASEEKKERNYLRLKGDTSNVMIKKEERKRRAVCLFDDDDDEPKTPVHGGAGKNVKSSSVSDAKKSNNAHSEKSDVVPLAQGSSSEREDTHLKEPSSQLYNDSLSIKQPLKEKDREKDDEVIPVHIPHSPENLDLKQLPSNAAKLSSTSPLKSPQLVPASKPSAERIKASKLSLKVSNNATTHKRVDHGLSKYSHNLSSSQNQVATHKKKPSLSAEISKTTPETLPQAVEVPVSTIGFKDTDALHVDRLEVSTEGKGTMKHLIAAALAKRKQAHSQFPPSGFPSVQGGTPSPSTVQPFLSVSSNFLHADMQGVYEHTSLASPPAKEHPSASHNQLDADEIEDRRVDSGQRGPGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNQKEEILGIAGASYIPIVQAALPRLLGAAAPPGASARENRRQCLKVLKLWLERKIFPESVLRGYVDDIGISNDDITVSFSLRRPSRAERAVDDPIREMEGMLVDEYGRCNDEQDSNATFQLPGFLSSHAFEEDEDEYEDDIPIKLCKDTFDASPADPTHALGESETSTVTPNDKRHCILKDVDRELEMEDVSGHPKDEKPTFFNSSDEIDLQLQVSDSNLDLTPSISNEMSATPEGSPPLPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPPPMLQPPPPPLPPSAPPVSLVPQLSGPARPLLSQPLMPSQSSHQSSPQLGYQQSVPHDFSGTNNGNQIVPMAGNSFPGGHNNAAVKNEIFPQPPAYAPTAGCSSQEPSGFNPSRQLEYGQNDMYLNAQVPQPNHQFQQGNPPYAQRYTHPAPPQNPPNPYPYSNPTVQQHLPHSFHPPFPLPSLPDGRRQFVADEQWRMPSSEYKTNNQHSVWRGRNPSCPGPPYGQEVVFDYGDEGHFQPPFERTPVTTVGFQRPISSNLPVAPISGHVVPQMMPCRPDIPSVNCWRPT 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01631 1459 MobiDBLite consensus disorder prediction 373 393 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 741 760 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 275 319 - -
Vian5g01631 1459 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1087 - -
Vian5g01631 1459 Gene3D - 824 969 IPR008942 -
Vian5g01631 1459 ProSiteProfiles CID domain profile. 825 970 IPR006569 -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 571 589 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 112 132 - -
Vian5g01631 1459 SMART PWWP_4 18 75 IPR000313 -
Vian5g01631 1459 Pfam CID domain 832 959 IPR006569 -
Vian5g01631 1459 Gene3D - 10 114 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 1301 1329 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 1203 1235 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 163 319 - -
Vian5g01631 1459 SMART 558neu5 832 967 IPR006569 -
Vian5g01631 1459 SUPERFAMILY Tudor/PWWP/MBT 15 111 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 171 185 - -
Vian5g01631 1459 CDD PWWP_HULK 21 110 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 658 685 - -
Vian5g01631 1459 Pfam PWWP domain 21 104 IPR000313 -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 738 760 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 1053 1073 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 186 234 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 415 434 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 501 627 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 1136 1189 - -
Vian5g01631 1459 PRINTS Proline rich extensin signature 1259 1276 - -
Vian5g01631 1459 PRINTS Proline rich extensin signature 1135 1147 - -
Vian5g01631 1459 PRINTS Proline rich extensin signature 1150 1166 - -
Vian5g01631 1459 PRINTS Proline rich extensin signature 1175 1187 - -
Vian5g01631 1459 PRINTS Proline rich extensin signature 1321 1346 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 1315 1329 - -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 1119 1235 - -
Vian5g01631 1459 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Vian5g01631 1459 MobiDBLite consensus disorder prediction 598 620 - -
Vian5g01631 1459 FunFam Enhancer of ag-4 2 825 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01631 Vian-Chr5 38860471 38872425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01631 - - ccaj:109798832 1706.03