Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01614 ATGAAGTTATCCTTATTGACCGTGTTTGTTATAACAATAGCATCGTTATCCATTATTCCAGTGTATCGATGCTCATCATCTTCTCAATCTCAATTCCAATGGCAGATCCTCACCAAGCAGAATTTCTCTTCACAGATCCGTCTCCACAATCACCTCCTCCTCCTCGTGGCGCTTCCCTGGTCCGGCGAGGCTCGATCTCTCATGAACGACGTTTCGCTTGCAGTTTCCGCTAAGCCTATAGAGTTCGCCTCTCTCAAACTCATGCGCATGCATAGAAACACCGAGAAGGTTCTAGCGGATTCTATAGGTGCTACCGATGAAATAACACTCGTTTATTTCCATTATTCTGTGTCTTATAAGTACCGTGGAAGATTCAGAGCTCAGAATATTCTGTTCTCGTTGTATCCTTATATATCCCTTGCGCCTGAGGAGGTTCCTCTCGCGGCTCTCAATTCTCCTCTGGATTTAAGATCATTCATTGATTCCACTGACAAAGCTATTGTTCTAGTTGATTTTTGTGGTTGGACGCCCAAATTACTCGCCAAAAGTACCAAAGATAACGGAACGCAAAATAGTTTCACTGTGCTTGGGAATCACCATGGAATGGATCTTAGCAGAGGGAATAGTAGAATGCATGTGTCAAGGGGGAAGACTAACAAGAAGGTGGCTGATGAGGACACGTGCAAGGCTGAACTTGGTGTTGATAAAGGGTTTTGTAAAGCTCCTTGGCTGGGGGAGTTTACCTTGTTAAATTATGGTCTTTTGGAGGGCTCCAAGGATAGGAATCATGATGTTGTACATTATTGTTCATCATCTGAAGAATTTGAGCGGTTTCAATCTTTTTACTTGAAATTCATGACTGTTGTGAGAGAATTTTTTTTGCCTCCGGAGCGAAACAGATTTGGCCTGGTTTCAAATAGGTCAATGCTTTCATCCCTAGGTGTTGGTGATTATGGCCCATGGTTTGCGGTTCAGTACCAGGCTGGATGTTCAAGTTGTTCAAATATTCTTAAAGAAGAGGATGACTTAAACTATGTTTTGCAGATGAATAATTATTATGTTAAAGAGCTGGAAGGTAATGATCAAGATCCCATTCTACCAGCAAATAAGCCATCTGTACTTCTATTTGTTGATAGATCATCCGAATCCTCAGAAACTAGGGGAAAAAGTAAGGAAGCTCTTGAAGCTTTTAGAGAATTGGCACAACATTATCATAGTGTGAATCAAGCAGGTAAGAAGAAAAATGACAGTCTTGATAAACATTATCATGGTTTGAAGAGTACATCTGAACATCCTAGGTTAAAGTTATCTATGCCAGCTCAGAAGATTAAACTAAAAGAGAAGATTTCTACAGTCATGATTATAAATGAGGGTAAGCAAGTTAGTTTAGACAATGTACCATCTGATCTTCAAGGGAGTTCTTTGAATGAAATATTGGCCTATCTCCTCCAGCGAAAGAATGATAGAAAACTAAGCTCCCTAGCAAAGGATCTAGGCTTCCAACTTTTATCTGACGATATGGATATTGGGTTAGCTAGTACACAACAACCATATTCAGAAGTTCAGTCAAATCAAATTCCAACAGAAACCTCTGAACAGGGCCTTGCGGATACTTTGGTGCTAGATGGGGATTCATATAGATCTGCTGCAGAGGTTGAGGAAAATCCCAAATTGACTGAGCTATCTTCTCGGGATGATGAAGTGAATAGACCTTCTATCATTACACATGAGGAGATAAAGTCTGTGCAGCCTGGGGAATCTGTTGCAGATAATGAACTTTCTACTACCGAATTTGTAAGATCAGAAACAGATGATTCTTCAGGTGGGAACAAGTATGAGGAAGAACTGACTCATTTTCTTGGTTTTAATGGTTCATTTTTCTATTCTGATGGTAATTATCAATTACTTGAAAGACTCACGGGTGGTTTTGGAGTTCCATCTTTGGTTATTGTTGATCCCATTCAGCAGCAACATTATGTTTATCCTGGTGAGAAAAGTTTCAACTTTTCTTCACTATATGATTTTCTTTCTGAGTTTCTTAATAGAACCCTACATCCATATCAGCGGTCAGAACATGTATTTCAAGGTCAAAAGGGGCCCATCCATCCTCCATTTGTTAATTTGGATTTTCATGAGATAGATTCTATACCTCAAATCACTGCTCATAGTTTCTCTGAACTTGCTATTGGTTTTAATCTTTCTAACAAAGAAGATACTTCCAATGCATGGAATAAAGATGTCTTGATCTTGTTCAGCAATAACTGGTGTTCTTTCTGCCAGAGAATGGAAATGGTTGTTCGGGAAGTATATCGGGCCATCAAGGGCTATGTGAATATGTTAAACAGTGGATCTCAGAACGTTGAAGGTATATCTGATCATGAAAATTTGGATCATGTCACGATGAAGCTTCCGGTGATCTACTTATTGGATTGTACTTTGAATGATTGTGATTTGATACTGAAGTCATTAGACCAGAGGGAAGTTTATCCTGCTCTAATTTTATTTCCAGCAGAAAAGAAGAAACCTCTTCTTTATGAAGGCGATATCGCTGTAATTGAGGTTATGAAATTTGTGGCAGAACACGGAAGTAACTTTCATAATCTTATCAGAGAAAAAGTGGCAGTTCTGTGGCTATCTGAAAGAGAAGGCAAAAATAAAAACTTATATGATGCTTTGCTAACTGATTTCAACCCAGAACCACTTCAATCACACAGCAAATATCATGGAGCCCAAGGTCATGACTTGTTAGACCAGGTGGTTAGACCTAGCCCAGTGAGTTCACCCGTAACAAATGGACTGCATGAAGCATTGCCTCACGTGGTGATTGGTTCAGTTCTAATTGCCACAGAAAAGCTTTTGGGCGTTCATCCGTTTGATGGATCAAAGATTCTCATTCTTGCAGCCAATGAAGTAACTGGATTTCAAGGTCTTATCCTCAACAAGCATATACAATGGAGTCTTCTGCCTAAATTGGAAGAAGAATTGGAAAAATTGAAAGAGGCTCCTCTCTCCCTGGGAGGTCCAGTAATGGAAACTGGAATGCCTCTTTTATCCTTAACTAGAACACTTTCTGGAAATCATTTACCTGAAATCCTTCCTGGAATTTACTTACTTGATCAAGTAACGACAATTCGTAAAATTGAGGAGCTGAAGTCGGCAAATGAATCAGTTGGAGATTACTGGTTTTTCTTGGGATATTCAAGTTGGGGATGGAAACAGTTATATGATGAGATGGCAGAAGGAGCTTGGAACTTGAGAAATTTGGTATCGCAAAGGAGCTTCAATCCAATATTCAATCCATACCACTCCATAGATAAGCTCAACAACACCTTCAGGTTGTTCTCTCGGATTCCCTCTTACAATAATCCCACTGTCACTGTCACTGCTTCTTCCAAAAGAAAGGATGACTTTAACTCTCCTTTGATTGGGAAGAACACGAACAGGGCTGCTCGCCGTTTGATCACAATATCACCTGGTGATGGCAGATATCACGGGGATTGGACAAGTGATTATCTAGTCTCTTTGCACGACCTAGACTTACAGGATTTGATTGAAGACGATGGTAACTCACATAAGAATGCGCAAGTTTTCATCAATCTCTCCGTCCAAAAGCATGCTAGCTTTGGTTTATCCGTAGATGGAAGAGTCACCACATCCTTCACTAGAAAGTGCAGCAACTGTTCTACTCCCTATTGCCGACAGATTGAAGCAAAATTTAACGTATGGGTTCTTATAGCACCTAAAGACGACCGCAAGCAGCCACAACTTGAAATTGGAGATGACCCTAATGTGATATATGTTAGACCTGGACACGAAGTTGATCTCGATTCTCTTGTACAAGATGCCATCCGACTAAACTCAGCAGTAAAAGTATAA 3876 0.4009 MKLSLLTVFVITIASLSIIPVYRCSSSSQSQFQWQILTKQNFSSQIRLHNHLLLLVALPWSGEARSLMNDVSLAVSAKPIEFASLKLMRMHRNTEKVLADSIGATDEITLVYFHYSVSYKYRGRFRAQNILFSLYPYISLAPEEVPLAALNSPLDLRSFIDSTDKAIVLVDFCGWTPKLLAKSTKDNGTQNSFTVLGNHHGMDLSRGNSRMHVSRGKTNKKVADEDTCKAELGVDKGFCKAPWLGEFTLLNYGLLEGSKDRNHDVVHYCSSSEEFERFQSFYLKFMTVVREFFLPPERNRFGLVSNRSMLSSLGVGDYGPWFAVQYQAGCSSCSNILKEEDDLNYVLQMNNYYVKELEGNDQDPILPANKPSVLLFVDRSSESSETRGKSKEALEAFRELAQHYHSVNQAGKKKNDSLDKHYHGLKSTSEHPRLKLSMPAQKIKLKEKISTVMIINEGKQVSLDNVPSDLQGSSLNEILAYLLQRKNDRKLSSLAKDLGFQLLSDDMDIGLASTQQPYSEVQSNQIPTETSEQGLADTLVLDGDSYRSAAEVEENPKLTELSSRDDEVNRPSIITHEEIKSVQPGESVADNELSTTEFVRSETDDSSGGNKYEEELTHFLGFNGSFFYSDGNYQLLERLTGGFGVPSLVIVDPIQQQHYVYPGEKSFNFSSLYDFLSEFLNRTLHPYQRSEHVFQGQKGPIHPPFVNLDFHEIDSIPQITAHSFSELAIGFNLSNKEDTSNAWNKDVLILFSNNWCSFCQRMEMVVREVYRAIKGYVNMLNSGSQNVEGISDHENLDHVTMKLPVIYLLDCTLNDCDLILKSLDQREVYPALILFPAEKKKPLLYEGDIAVIEVMKFVAEHGSNFHNLIREKVAVLWLSEREGKNKNLYDALLTDFNPEPLQSHSKYHGAQGHDLLDQVVRPSPVSSPVTNGLHEALPHVVIGSVLIATEKLLGVHPFDGSKILILAANEVTGFQGLILNKHIQWSLLPKLEEELEKLKEAPLSLGGPVMETGMPLLSLTRTLSGNHLPEILPGIYLLDQVTTIRKIEELKSANESVGDYWFFLGYSSWGWKQLYDEMAEGAWNLRNLVSQRSFNPIFNPYHSIDKLNNTFRLFSRIPSYNNPTVTVTASSKRKDDFNSPLIGKNTNRAARRLITISPGDGRYHGDWTSDYLVSLHDLDLQDLIEDDGNSHKNAQVFINLSVQKHASFGLSVDGRVTTSFTRKCSNCSTPYCRQIEAKFNVWVLIAPKDDRKQPQLEIGDDPNVIYVRPGHEVDLDSLVQDAIRLNSAVKV 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01614 1291 Gene3D Glutaredoxin 607 690 - -
Vian5g01614 1291 Pfam Uncharacterized ACR, COG1678 958 1085 IPR003774 -
Vian5g01614 1291 PANTHER TRANSPORTER, PUTATIVE (DUF179)-RELATED 171 1087 IPR003774 -
Vian5g01614 1291 Gene3D - 939 1103 - -
Vian5g01614 1291 SUPERFAMILY Thioredoxin-like 733 863 IPR036249 -
Vian5g01614 1291 Pfam Large ribosomal RNA subunit accumulation protein YceD 1212 1286 IPR003772 -
Vian5g01614 1291 Gene3D Glutaredoxin 33 135 - -
Vian5g01614 1291 SUPERFAMILY VC0467-like 939 1092 - -
Vian5g01614 1291 Gene3D Glutaredoxin 711 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01614 Vian-Chr5 38685306 38694511 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01614 - - gmx:100814325 1711.81