Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01606 ATGGCTTCCAGAACCCTAACGGACTTTTTCCAACCCGCTTCGAAGCGCTTGAAGCCCTCGCTCCCCCAATCCTGCAAATCCGGTGACGCCAACGCCTCCACCCTCTCTGTTGACCAGAACTTGCGCGTGGAATACAACAAGCTCCTCGCCAAGTCCAAACGGAATCTCAAACTCTGCGTCGAGAGGGTCTCCAAGACCAAAGGTCTAAGTGGCGTGAAGCTGGAGGAGTTGCTGGTGGAGGAAACATGGTTGGACGCTATCCCTGGTGAACTTCAGAAACCTTATGCACTGACTCTCTCGAAGTTCGTGGAAAGTGAGATTTCAAGCCACGATGACGTCGTATACCCTCCCACGCACTTGATTTTCAACGCCCTTAATTCTACCCCTTTTCATAGAGTCAAAGCTGTCATCCTTGGCCAGGACCCTTATCATGGACCTGGTCAAGCAATGGGGCTCTCATTCTCAGTTCCTGAGGGAATTAAAGTCCCTTCCAGTTTGGTGAATATATTCAAGGAGCTTCACCAAGACCTTGGTTGCACCATTCCACCCCATGGAAATCTTCAAAAATGGGCTGTGCAGGGTGTTCTCTTGCTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCCAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACAATCTCACAGAAGAGGGAGGGAGTTGTGTTTTTGTTGTGGGGAAATTCTGCTCGGGAGAAATCCAGGTTAATCGATGCAACAAAGCATCACGTTCTTACAGCTGCACATCCTTCTGGTTTGTCTGCAAGTAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAATGGGTAGTCATCCCATAGATTGGCAACTATAA 897 0.4872 MASRTLTDFFQPASKRLKPSLPQSCKSGDANASTLSVDQNLRVEYNKLLAKSKRNLKLCVERVSKTKGLSGVKLEELLVEETWLDAIPGELQKPYALTLSKFVESEISSHDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSASRGFFGCRHFSRTNQLLEQMGSHPIDWQL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01606 298 SMART UDG_2 126 286 IPR005122 -
Vian5g01606 298 Hamap Uracil-DNA glycosylase [ung]. 80 297 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vian5g01606 298 PANTHER URACIL-DNA GLYCOSYLASE 25 298 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vian5g01606 298 SMART UDG_2_a 126 286 - -
Vian5g01606 298 FunFam Uracil-DNA glycosylase 73 298 - -
Vian5g01606 298 ProSitePatterns Uracil-DNA glycosylase signature. 134 143 IPR018085 GO:0006281|GO:0016799
Vian5g01606 298 CDD UDG-F1-like 95 296 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vian5g01606 298 Gene3D - 61 298 IPR036895 -
Vian5g01606 298 SUPERFAMILY Uracil-DNA glycosylase-like 78 298 IPR036895 -
Vian5g01606 298 Pfam Uracil DNA glycosylase superfamily 131 285 IPR005122 -
Vian5g01606 298 NCBIfam uracil-DNA glycosylase 81 290 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01606 K03648 - gmx:100818241 549.666