Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01583 ATGATGGGTGGCAGCGAGGATCCGAACAACAAAGGCGATTCTCCATTCGAATCCTCGGCATCGCAACCCTTTCTGTCGAAACCCTCGTACCCTTCTTCGGCATCTTCGGCGGTGGAAGAAGAATCGGAGTCAAACCAGCAATACCTTCACATCACTTACAATTCAGGTCCTCGTTCCTTCAAGGACCTCCCTTTCCTCATCCTCTTCCTTCTCTTTGTCATCTCCACCTTCGCCTTCGGCATTTTCGCCGTCTTCCACCGGAACACCGACTACCCCTCTCTCTCATCTTTCTCCTACGACGCCTCCTCCTCCTCCTGCGTCCTAAACCCTTCTTCCACTTCTTCCTCCCTTTCCTCGTGGCTTTCCCTCGATTCTTCCTCGCACTTGGTCAAGGGTCTCATATGGACCCTCGTCATCACCTTCGTTCTTAGCATCCCCCTGTGCTGGGCTTTGCTTCTCTTACTCAAGCATTACACCAAACAAATTGTCTACGCTGCGATTCCCTTCTTCATCGCCATCCCTATTTTCCTCAACGTCTATTGGTTCGTCGCATGCACCCTCCGCTCGTCTTGCAGCACCGCCTTCCCCCTCGCGTATCGGGTTGTCGTGATGGTCTTCGTCTTCTTGGTGATTGGGGCCGTCGTGTGGATCTTGGTCGTGAATTGGCATCGCGTGGAGCTCACTATCAGCATAATCGGGGTCGCTTCCCACGCACTTTCCAGGAATTTGAACTTGTTCGGGGTGCTGCCTTGTTTGATCGTCGGGCTTCTCGCGTATTACGTGCCAATAGTGGTTTTCATGGTGTTTTCGAGGTTTAATGGGAAGATTGCGGTGAAGAATTTGGCGAGCGGATATGCTTGTGTGTGGAAGGAAGATTCATGGGTTCCTGCTTATTTTGCTTTGGCTATTCTCACCATGTTGTGGTCTGCGGCAGCTATGGTTGAAGCTCAAGTTTATGTCATCAGTGGCACCATAGCTAATTGGTATTTCTCTAAGGATCATGAAACTCCTAAGCGGAGTATTCGAACTTCTCTCAGAAATGCTTTTGGTTCTTCTTCTGGCACCATATGTTTGTCGGGGTTGCTTATCTTTGTTGTTCGAATGGTGCGTTCTGCGGTTGACAGTGCAAGACAAGAGGATATTCCCGGGATAGTGAACCTTGTTCTGCGGTGCTGTGTAAACGCCTTACTGACAGCAGTTGATTTTCTCAACAAGTTCACCGTAAACTTTGCTGCAATAACTGGTGAAGCCTACTGCTCTTCTGCAAGGATGACATATGAACTACTGAGACGCAATCTTCTCTCTGCTGTTTTCGTGGAGACAATCTCATCTCGTATTCTGGCGGGAATCGTTTTTGTCTTTTCTGCAACATACACAATAGTGGCCTGTGTTATCTTAAAAGCTGGTACCAATCTTGGGACTGATTCATATTTTGTGGCTGCAATGGCATGGGTGCTACTGATAGTAGTGTTGGGTTACCTGGTGCATGTGCTAGACAATGTAATCGACACAATTTACATCTGCTATGCGATAGACCGTGATAGAGGAGAGGTTTGTAAACAAGATGTCCATGAGGTTTACGTTCACCTACCCATCAGTAGAAGTCTCAGACAATCTGTTACCCCAAGAACTCTAGGTGTGTAA 1644 0.4824 MMGGSEDPNNKGDSPFESSASQPFLSKPSYPSSASSAVEEESESNQQYLHITYNSGPRSFKDLPFLILFLLFVISTFAFGIFAVFHRNTDYPSLSSFSYDASSSSCVLNPSSTSSSLSSWLSLDSSSHLVKGLIWTLVITFVLSIPLCWALLLLLKHYTKQIVYAAIPFFIAIPIFLNVYWFVACTLRSSCSTAFPLAYRVVVMVFVFLVIGAVVWILVVNWHRVELTISIIGVASHALSRNLNLFGVLPCLIVGLLAYYVPIVVFMVFSRFNGKIAVKNLASGYACVWKEDSWVPAYFALAILTMLWSAAAMVEAQVYVISGTIANWYFSKDHETPKRSIRTSLRNAFGSSSGTICLSGLLIFVVRMVRSAVDSARQEDIPGIVNLVLRCCVNALLTAVDFLNKFTVNFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSATYTIVACVILKAGTNLGTDSYFVAAMAWVLLIVVLGYLVHVLDNVIDTIYICYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSVTPRTLGV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01583 547 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 34 513 IPR007603 GO:0022857|GO:0055085
Vian5g01583 547 MobiDBLite consensus disorder prediction 1 37 - -
Vian5g01583 547 Pfam Plasma-membrane choline transporter 206 514 IPR007603 GO:0022857|GO:0055085
Vian5g01583 547 MobiDBLite consensus disorder prediction 11 37 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01583 - - gmx:100801313 876.7