Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01578 ATGTTTCAACAAAATTCATTCTACCCACAAGTTGATTTGACAAATCCAGAAGCTGCTTCTCCCTTTTCCCACCATTCATCGTCATCTTCTTCTTCCATTTATCCTACAGTAGAAACAGAAAATCTCATTGCGGAAGAGCCAAACGCGACACAAGCCATGGAAAACGTTCTCGTCACGGTTCCGGGTGCGATTCTGCATCTCATAGAAAAGGATTCAAGCGTGCACCTCGCTTCAGGGGATCTCACCATATCCAGCCTCGGAGAAGGGGACAAAGTGGTGGCTGTTCTCGCTCGCGTCGGAGACAAGGTTCAGTGGCCGTTGGCCAAGGACGTGGCGGCGGTGAAGCTGGACCAGTCGCACTACTTCTTCACGCTGCAAGTTCCACAGAAACAGGCGGAGAACGGATTTGAGGTGTTGAATTATGGGTTGACGGTGGCGGCGAAGGGGCAAGAGAGGGTGCTGAAGGAACTGGACGGGGTTCTGGAGAAGTATAGCTTTCTGTCGAAGGAGAAAGTGAAGGGTGTGAGTGGATGGGAGGTGTTGGATGGTTCCGTGTCGACAGAGACATCACCCGAAGAATTAAAATCAGAGGAGAAGAGGGAAGTGATCGAGGAGCGTTCTGGTGCTTATTGGACAACGTTGGCACCAAACGTGGAGGATTACAGTGGGAGTTTTGCGAGGTGGATTGCTGCGGGGTCGGGGCATGTTATTAGGGGGATTTTGTGGGCTGGGGATGTTACTGTGGAGAGGTTGAAGTGGGGGAATGATTTCATGAAGAAGAGATTGGAGCCTGGTTCCCACTCCCAGATGAGTCCTCAGGCATTGGAGAATATGAAAAGGGTCAAGAAGTTGACCAAGATGTCAGAGAAAGTAGCCACTGGTGTCCTCTCTGGGGTTGTCAAGGTGTCTGGATTCTTCACAAGCTCTGTAGTCAACTCCAAACCTGGAAAGAAGTTCTTTAGTCTTCTTCCTGGAGAAATCGTCCTTGCTACCATGGATGGATTCAATAAGGTGCTGGATGCTGTAGAAGTAGCTGGGAGGAATGTTATGTCCACTTCGTCATCCGTGACCACTGAACTCGTTTCACATAAGTATGGAGAGCAAGCGGCCCAGGTTGCTAATGAAGGTCTTGACGCCGCAGGGCATGCAATTGGGACAGCTTGGGCAGTGTTCAAACTTAGGAAGGCACTCAACCCTAAGAGTGTGATCAAGCCAACAACACTGGCCAAAGCTGCTGCTGAAGCAAATTCTGCCAAACTCAAGGCTAAGAAATGA 1275 0.4988 MFQQNSFYPQVDLTNPEAASPFSHHSSSSSSSIYPTVETENLIAEEPNATQAMENVLVTVPGAILHLIEKDSSVHLASGDLTISSLGEGDKVVAVLARVGDKVQWPLAKDVAAVKLDQSHYFFTLQVPQKQAENGFEVLNYGLTVAAKGQERVLKELDGVLEKYSFLSKEKVKGVSGWEVLDGSVSTETSPEELKSEEKREVIEERSGAYWTTLAPNVEDYSGSFARWIAAGSGHVIRGILWAGDVTVERLKWGNDFMKKRLEPGSHSQMSPQALENMKRVKKLTKMSEKVATGVLSGVVKVSGFFTSSVVNSKPGKKFFSLLPGEIVLATMDGFNKVLDAVEVAGRNVMSTSSSVTTELVSHKYGEQAAQVANEGLDAAGHAIGTAWAVFKLRKALNPKSVIKPTTLAKAAAEANSAKLKAKK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01578 424 PANTHER SPARTIN 26 421 IPR045036 -
Vian5g01578 424 Pfam Senescence domain 227 413 IPR009686 -
Vian5g01578 424 Coils Coil 410 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01578 Vian-Chr5 38341053 38342615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01578 K19366 - gmx:100802385 672.93