Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01567 ATGGGTGCTTTGGATCACATCTCCGAGCTCTTCGACTGCTCCCACACCAGTTCCAAACTCAAGAAGAAGCGCAAACAATTCCAGACGGTGGAGGTGAAAGTGAAGATGGACTGTGAAGGGTGTGAGAGGAAGGTGAAGAAATCGGTGGAGGGAATGAAAGGGGTGACTCAGGTGGAGGTGGATCGGAAGGCTAGTAAGGTCACCGTTTCGGGCTACGTTGAACCCTCTAAGGTTGTGTCTCGCATCTCTCACCGCACTGGAAAGAGAGCGGAGCTATGGCCGTACGTCCCGTACGACGTCGTTGCGCACCCTTACGCGCCCGGTGTCTACGACAAGAAAGCGCCCTCTGGGTACGTGCGAAACGCCGACATTGACCCTCGTCTGACTAACCTCGCACGTGCCAGCTCCACCGAGGTCAGGTACACCACCGCCTTCAGCGACGACAACCCCGCCGCATGTGTCGTCATGTGA 471 0.5669 MGALDHISELFDCSHTSSKLKKKRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQVEVDRKASKVTVSGYVEPSKVVSRISHRTGKRAELWPYVPYDVVAHPYAPGVYDKKAPSGYVRNADIDPRLTNLARASSTEVRYTTAFSDDNPAACVVM 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01567 156 SUPERFAMILY HMA, heavy metal-associated domain 27 94 IPR036163 GO:0046872
Vian5g01567 156 Pfam Heavy-metal-associated domain 32 88 IPR006121 GO:0046872
Vian5g01567 156 Gene3D - 24 91 - -
Vian5g01567 156 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 29 153 IPR045181 GO:0046872
Vian5g01567 156 CDD HMA 31 91 IPR006121 GO:0046872
Vian5g01567 156 ProSiteProfiles Heavy-metal-associated domain profile. 27 91 IPR006121 GO:0046872
Vian5g01567 156 FunFam Heavy metal-associated isoprenylated plant protein 26 14 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01567 Vian-Chr5 38242691 38243255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01567 - - gmx:547973 311.227