Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01554 ATGACCATCAGCTCATCTTCGAAAAAGCACGGTCAAGATCTGCCAGAATTAAGTGGTCCTACCCCCAAATCCCAGCGAACCAAAATGGGCAAATCTGATGACAACGATAAGAAGAACCTGGGTAAGAAACTCAAAGATGTGGAAATAAGCGTTCCAATAGTGTATGGAAACATAGCATTTTGGCTTGGGAAAAAGGCTAGCGAGTATCAGTCGCATAAATGGACAGTATATGTTCGTGGAGCAACCAATGAGGATCTTGGGGCGATAATAAAACGTGTTGTTTTTCAGTTGCACTCTAGTTTCAATAATCCCACCCGTGTTGTGGAGTCACCGCCTTTTGAACTCTCAGAGGCAGGATGGGGGGAATTTGAAGTTGCCATCACACTTTATTTTCACAGTGATGTTTGTGACAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCTGCAAAAAAGCCTGTTGTTGTGGAGTTTTATGATGAGATAGTTTTCCCTGATCCTTCGGAGGCCTTTTTAGCTCGTTTGCAGAGTCATCCAGCTGTGAACTTACCAAGATTACCTGCTGGGCTTACATTGCCTCCTCCTGTACCTGTTGAGGATGCAAGTAAAAGGAGGAAAGGTGATACTAAAGATCATTCTTTAAGTCAATGGTTCACGAATTTCTCAGAAGCAGATGAGCTCTTACAGCTTGCGGCAGCTCGACAGCAGGTTCAAGCACATATTGCTAAACTCAGACGACAGATAAACTTGATAGATGGACAGCATCAGCAGTTTAAATCTTCTTCTGACCAGTAG 822 0.4294 MTISSSSKKHGQDLPELSGPTPKSQRTKMGKSDDNDKKNLGKKLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTVYVRGATNEDLGAIIKRVVFQLHSSFNNPTRVVESPPFELSEAGWGEFEVAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSAKKPVVVEFYDEIVFPDPSEAFLARLQSHPAVNLPRLPAGLTLPPPVPVEDASKRRKGDTKDHSLSQWFTNFSEADELLQLAAARQQVQAHIAKLRRQINLIDGQHQQFKSSSDQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01554 273 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
Vian5g01554 273 MobiDBLite consensus disorder prediction 1 26 - -
Vian5g01554 273 MobiDBLite consensus disorder prediction 195 219 - -
Vian5g01554 273 FunFam Transcription initiation factor TFIID subunit 14 44 197 - -
Vian5g01554 273 Coils Coil 236 256 - -
Vian5g01554 273 Pfam YEATS family 71 150 IPR005033 GO:0006355
Vian5g01554 273 PANTHER PROTEIN AF-9 HOMOLOG 39 271 IPR005033 GO:0006355
Vian5g01554 273 Gene3D YEATS domain 44 196 IPR038704 -
Vian5g01554 273 MobiDBLite consensus disorder prediction 1 39 - -
Vian5g01554 273 CDD YEATS_TFIID14_like 49 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01554 Vian-Chr5 38107067 38110057 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01554 K11341 - gmx:100790602 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01554 5 38107067 38110057 Vian5g01554 5 38107067 38110057 ECH