Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01547 ATGGAAATGTGTGGAGCCACTGCTTTGACATGGTCTCACACCATCTCTCCGTCGCTTCATCTTCCTCGATCTCTCTGTACCAGAGAGACCAGGAGCTTTAGGGTTTGGTGCGTCACCAATCAAGATCCCAAGATTCACCAGATTGCTTCTATATGTCTAGGAACCATGCCTTTTGTTGAACATTACATTGATAATTTGCATATTGAGAAGGGAAGTAAAATGATCATATCTGTAACTGGAGCAACGGGTTTTATTGGTAGAAGGTTGGTGCAAAGACTGCATGCAGACAATCACAGTGTTCACGTCTTGACGCGATCTAAATCTAAAGCAGAAACATTTTTTCCGGCAAAAGACTTTCCAGGAATCAAGATTGCACAAGAGCCAGAATGGAAAGATAGCATTCAGGGCTCAACGGGGGTTGTGAATTTGGCTGGACTGCCCATAAGTACCCGGTGGTCTCCTGAGATAAAGAAGGAAATCAAGCAGAGCAGGATTAGAGTGACCTCAAAGGTTGTAGAATTGATAAACAGTGCACCAGATGAAATTCGACCTAAAGTTCTAGTTAGTGCAACAGCTGTTGGTTATTATGGTACCAATGAGACACAAGTCTTTGATGAACAAAGTCCATCAGGAAATGATTATTTGGCCGAGGTTTGTAGGGAGTGGGAATCAACAGCCCTAAAGGTAAACGGAGGTGTTAGACTGACTCTAATTCGCATTGGTGTTGTTCTTGGTAAAGATGGTGGAGCACTAGCTAAAATGATACCTCTCTTCAATTTGTTTGCTGGTGGACCTCTCGGTTCTGGAAAACAATGGTTCTCCTGGATTCACTTGGATGACATTGTCAATTTGATATATGAAGCGCTATTAAATCCATCTTACAAAGGTGTTATCAATGGAACTGCACCAAATCCTGTGCGATTGGCAGAATTGTGTGACCAGCTGGGACATGTATTGGCTCGTCCCTCATGGCTGCCGGTACCGGATTTTGCACTCAAGGCTGTCCTTGGAGAAGGTGCTTCTGTGGTTTTAGAAGGGCAGAAAGTGCTTCCTACTCAAGCTAAGAAGTTGGGTTTCACCTTCAAATATTCTTACGTCAAGGATGCCCTTAAAGCAATTCTTTCATGA 1128 0.4344 MEMCGATALTWSHTISPSLHLPRSLCTRETRSFRVWCVTNQDPKIHQIASICLGTMPFVEHYIDNLHIEKGSKMIISVTGATGFIGRRLVQRLHADNHSVHVLTRSKSKAETFFPAKDFPGIKIAQEPEWKDSIQGSTGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVELINSAPDEIRPKVLVSATAVGYYGTNETQVFDEQSPSGNDYLAEVCREWESTALKVNGGVRLTLIRIGVVLGKDGGALAKMIPLFNLFAGGPLGSGKQWFSWIHLDDIVNLIYEALLNPSYKGVINGTAPNPVRLAELCDQLGHVLARPSWLPVPDFALKAVLGEGASVVLEGQKVLPTQAKKLGFTFKYSYVKDALKAILS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01547 375 Pfam Domain of unknown function (DUF1731) 327 373 IPR013549 -
Vian5g01547 375 Pfam NAD dependent epimerase/dehydratase family 76 293 IPR001509 -
Vian5g01547 375 Gene3D - 69 364 - -
Vian5g01547 375 CDD SDR_a8 76 374 - -
Vian5g01547 375 NCBIfam TIGR01777 family oxidoreductase 76 370 IPR010099 -
Vian5g01547 375 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 70 374 - -
Vian5g01547 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 71 371 IPR036291 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01547 K07071 - gmx:100814881 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01547 5 38032919 38037358 Vian5g01547 5 38032919 38037358 ECH