Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01545 ATGGGAGCTATCGCTGGAGAAGAGCTGCTGAAATGGGAGAAGATGCAAGGAGTGAGTGGCCGCGAAGAGAAGATTCTTGTGTCAATAAGGCTGAGGCCTCTGAACGAGAAGGAGATTGCTGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTATCGGAACACACTTCGTGAGGGATCCACATTTCCAAGTGCCTACACATTTGACAAAGTATTTCGGGGTGATTGTGCCACAAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTCGCTCTTTCAGTTGTTGGTGGAATTAACTCCAGTATTTTTGCGTATGGGCAAACAAGTAGTGGAAAGACATATACGATGGTTGGAATAACCGAATACGCTGTTGCTGATATTTTTGACTATATAAAGAGGCATGAAGAAAGAGCATTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTCGGGACCTCCTCAGTACGGACAACACTCCTCTTAGGCTACGTGATGATCCAGAGAGAGGCCCCATTTTAGAGAAACTCACAGAGGAGACTCTTCGAGACTGGGGACATTTAAAAGAGCTTATAGCCTTCAGTGAAGCTCAGAGGCAGACTTCCATTAACGGAGTTGCAACATTTCAGACAATGGAAAGTTCTGCCAGGGAATTCCTAGGCAAAGGCAACTCAGCCACCCTAGTAGCTAGTGTGAATTTTGTTGATTTGGCAGGGAGTGAGCGTGCATCTCAGGCATCATCAGCTGGGATGAGACTAAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTGGAACAGTTATTCGCAAGCTTAGGTTGTCTACTCACTCCTCAGTTTATGGGGCTTTCCTTATTTATGCAGTTTCTAATATGCCTTGCTTGGGTGGAAATGCTAGGACGGCTATCATTTGCACTTTGAGCCCTGCACGAAGTCATGTTGATCAGACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTCGTGATGTCTGATAAGGCCTTGGTAAAGCATTTGCAGAAAGAGGTGGCTAGATTGGAGAGTGAGTTGAAAACTCCTGGTCCCGTTACTGCCAATTGTGATTATGCAACATTGTTGAGAAAGAAAGATATCCAGATAGAGAAGATGGAGAAGGAAATTAGGGAGCTAACTAAGCAACGTGACCTTGCTCAATCAAGGGTTGAAGATTTGCTGCGCATGGTCGGAAAGGAGCAGATATCGGAAAAAGAAGGGGAAGATATATGGGATGATGACTGTTCAGTATCAGAGTCATCGAGCATTTGTGGTCCTCATCGTCCTAATACACACATCAGAGAGTTCAACAACCCTCGTTATAATGACGGAGACAGTGGAAGTAATCCTGATGGTAGATCCAATCATTTGTTATCTATTTTTGGTTGTACAGAAGACACTGAAGATTACTGCAAGGAAGTTCGATGTGTTGACAATGGGGAGTTAACTTCAGCAATATCTGGAGAGGAAAGTGGAACAAGCCAGGAAATATCTTCACATTTGAATGAAGATGATGGAGACAGTCAGATCCAAGAAAATTCAACACTTCTGGAGCAGAGGCTGCATGATGTACAGTCAACCATTGATTCTCTCGTATGTCCTTCCCCTGATGAGCAATCTCCACAGGTCATGTCAGAAAATATGTCAAATTATAGGAATCTTCAATTAACTAGAAGCTGGAGTTGTACGGAGTATCACATGACTGGTTCTCCGGAGTCAATGGGAGAAATACAGAGGACTCCAGCCAATGGATATGACAAAGGATTCCCTGGAAGACCAGATGGTTTGCGGAGGAAGTTTCCTCCATTAAATTATGATGGTTCCATAAAATTGTTAAGGAATGGTTCTCAGTCTTCCATGGGAAGTCTTTCTGTGGATGATCTTAGAGCGTGCGGCATCAGAACATCTGCTGATGAGGATATTGCTAGCATCCAGACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACAAGAATATGAAAAGCAGCTTGTTGATGGTCAGGACCACGAGGCAGGAAGAAAGAGGAACGTGAAAGATGTAGGTGTGGATCCGATGTTAGAGACACCTGGAACTCCTTTAGATTGGTCTCTGCAATTCATGAGTCAGCAAAAGGAGATAATTGAACTGTGGCAATCATGCTGTGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCAACAGACTCCATTTACATGGAGGTAGAACTTAGAAGACTATCCTTCCTAAAAGAAACATTTTCTGATGGGAACCAGTCTGTGAGAAATAGTCAGACAATCACACTAGCTTCAAGCGTGAAAGCACTTCGGCGAGAAAGAGGAATGCTTGTGAAGCTTATACAGAGGAGGCTTTCCGATAAGGAGAGAATAAGGCTGTACGAGGAGTGGGGCATTTCATTGGATTCAAAGCGCAGGAGAATGCAGCTAGTGAACCGTTTGTGGAGCGAAAATGATATTAACCACGTAATGCAAAGTGCTACAATAGTTGCCAAGTTAGTGAGGTTTTGGGAGAGGGGCAAGGCCCTCAAGGAGATGTTTGGGCTTAGCTTCTCACCCCTAATCACAGGGCGGAGATCATCTTTTTCGTGGAAAAATAGCTCAGCATCTCTTTTATAG 2691 0.434 MGAIAGEELLKWEKMQGVSGREEKILVSIRLRPLNEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDKVFRGDCATRQVYEEGAKEVALSVVGGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIKRHEERAFILKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPILEKLTEETLRDWGHLKELIAFSEAQRQTSINGVATFQTMESSAREFLGKGNSATLVASVNFVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLRLSTHSSVYGAFLIYAVSNMPCLGGNARTAIICTLSPARSHVDQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKEVARLESELKTPGPVTANCDYATLLRKKDIQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGKEQISEKEGEDIWDDDCSVSESSSICGPHRPNTHIREFNNPRYNDGDSGSNPDGRSNHLLSIFGCTEDTEDYCKEVRCVDNGELTSAISGEESGTSQEISSHLNEDDGDSQIQENSTLLEQRLHDVQSTIDSLVCPSPDEQSPQVMSENMSNYRNLQLTRSWSCTEYHMTGSPESMGEIQRTPANGYDKGFPGRPDGLRRKFPPLNYDGSIKLLRNGSQSSMGSLSVDDLRACGIRTSADEDIASIQTFVAGMKEMVKQEYEKQLVDGQDHEAGRKRNVKDVGVDPMLETPGTPLDWSLQFMSQQKEIIELWQSCCVPLTHRTYFFLLFRGDPTDSIYMEVELRRLSFLKETFSDGNQSVRNSQTITLASSVKALRRERGMLVKLIQRRLSDKERIRLYEEWGISLDSKRRRMQLVNRLWSENDINHVMQSATIVAKLVRFWERGKALKEMFGLSFSPLITGRRSSFSWKNSSASLL 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01545 896 ProSitePatterns Kinesin motor domain signature. 236 247 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vian5g01545 896 MobiDBLite consensus disorder prediction 442 474 - -
Vian5g01545 896 Pfam Kinesin motor domain 30 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian5g01545 896 Coils Coil 346 366 - -
Vian5g01545 896 MobiDBLite consensus disorder prediction 506 520 - -
Vian5g01545 896 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian5g01545 896 PRINTS Kinesin heavy chain signature 237 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian5g01545 896 ProSiteProfiles Kinesin motor domain profile. 24 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian5g01545 896 MobiDBLite consensus disorder prediction 456 474 - -
Vian5g01545 896 SMART kinesin_4 22 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian5g01545 896 Pfam Domain of unknown function (DUF3490) 719 877 IPR021881 -
Vian5g01545 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 369 IPR027417 -
Vian5g01545 896 PANTHER CENTROMERE PROTEIN E 22 880 IPR027640 GO:0003777|GO:0007018
Vian5g01545 896 MobiDBLite consensus disorder prediction 506 530 - -
Vian5g01545 896 Coils Coil 383 417 - -
Vian5g01545 896 Gene3D Kinesin motor domain 17 368 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01545 Vian-Chr5 38022403 38028086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01545 22 418 Miscellaneous Gene Families AT5G06670 35.952 3.94e-62 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01545 K11498 - gmx:100820012 1526.53