Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01532 ATGGCATTCAAACTCAAGCCGCTACCTCTTCCTTCTTATCTTCACTCCTCTCCCCGCCAAAACCCTAATTTCACACTTTCAAACCGTTCTCTTCCTCGATTTTTCTCTGCACATTCTCTTCCTCGATTTTTCTCTGCACATTCTCTTCCTCTCGGTCTCTCCCTCTCAACCACAGCTTCAGCATGCACGTTTCATCGCAATGCCTTCGTAACCGCTCGCGCATTTCGAAGTGATGAAATCACTGACGAAGGTCAAGAAGAAGAAAAGGAAGAACAAGTATCGAGGCAGGGTGAGAAAAAGGAACTAGCGAATCAAGGAATATTGGATCAGATAAAAGAAATTGTGATGTTTACAGGTCCAGCAACCGGACTTTGGATATGTGCACCACTCATGAGTCTCATTGATACTGCAATTATTGGTCAGAGAAGCTCCATTGAACTTGCTGCTCTAGGTCCTGCTACTGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCGATTGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAACAAGAAGTGCAACATCACATATCTATCTTGGTTTCTGTTGGGTTATCTTGTGGCGTTATGATGCTTTTGTTCACAAGGCTATTTGGTTCTGCAATAATAACTGCTTTCACTGGATCAAAGAATGCACACATAGTACCTGCAGCTAGCAGTTATGTAAAGATTCGAGGCTTGGCGTGGCCTGCTTTACTTGTTGGATGGGTTTCTCAAAGTTTTGTTGATCCTGAGTTAATGATTCGAGGCTTGAATATTGATATCATGTTGAAAATAATATTCGTTGTTGCTGCTTGCATGATGATTAAAACTCTAAACAAAAAGGGATATAATGCACTTGCCTTCTCCATTCCGTCAGGGAAGGAACTTCTGATGATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTGCTTATATATTTCGCTACATCATTGGGTACACATACAATGGCTGCTCATCAAGTAATGGTCCAAACATATTCCATGTGTACTGTTTGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAATTGATATACGGAGCTAATCGCAGCTTATCAAAGGCCCAATTGCTCCTAAGGTCTCTTCTGACAATCGGAATCATACTTGGATTATTGCTGGGGATTGTTGGAACATCGGTTCCTTGGTTATTTCCATACATTTTTACACCTGATCGGATGGTCATTCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCACTGTCTATAACCCCCCCTACTCATAGCCTCGAGGGAACATTGCTGGCTGGGCGGGACCTGAGATTTATAAGTTTGTCAATGACTGGATGCTTTTGCGTGGGTTCACTGCTATTATGGGCCATGAGCAGTAGATTTGGTTTACTTGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGCTTTTCAATTGCCCTTCAGCGCCTTCTTTCTCCCAAGGGTGTTTTGTACTCAGGAAACACAGATCAGCATGAGCTGCGAAAGCTGAGGACTACTTGA 1584 0.4306 MAFKLKPLPLPSYLHSSPRQNPNFTLSNRSLPRFFSAHSLPRFFSAHSLPLGLSLSTTASACTFHRNAFVTARAFRSDEITDEGQEEEKEEQVSRQGEKKELANQGILDQIKEIVMFTGPATGLWICAPLMSLIDTAIIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKQEVQHHISILVSVGLSCGVMMLLFTRLFGSAIITAFTGSKNAHIVPAASSYVKIRGLAWPALLVGWVSQSFVDPELMIRGLNIDIMLKIIFVVAACMMIKTLNKKGYNALAFSIPSGKELLMIFGLAAPVFMTMMSKVAFYSLLIYFATSLGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGANRSLSKAQLLLRSLLTIGIILGLLLGIVGTSVPWLFPYIFTPDRMVIQEMHKVLIPYFIALSITPPTHSLEGTLLAGRDLRFISLSMTGCFCVGSLLLWAMSSRFGLLGCWFSLAIFQWARFSIALQRLLSPKGVLYSGNTDQHELRKLRTT 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01532 527 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 276 509 IPR044644 -
Vian5g01532 527 Pfam MatE 126 256 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01532 Vian-Chr5 37896822 37903257 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01532 K03327 - gmx:100778835 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01532 5 37896822 37903257 Vian5g01532 5 37896822 37903257 ECH