Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01531 ATGGCGGCAGTAGCAGCAATATCCTCTCATCTAATGTTTGTTCTTCGTTTACAGCCATTGCCATTATCACCCTCTTCTTCTTTCTTTTCTTTCCTCAAACCTCTTCTTGTTTCGTCTCCTAATAGTATATCTAGACCCTTTCCACGTCTCCAATTTCCACCGCTTCGAAAATCTCTCTGCTCCATTTCCTCTTCTGTTGTGGTTTCCGAAGACGGCGAGGAAACAGAGATTGGGGATGATGAATTGGATAGTGAAAGAGGCGATTTTGGAGATACCCAATTAGATTCAACGTCGTCGCCGTTGGTGAGAAAGAGGGAGGAGAGGCTGAAATTGGAGGTGCCGAGTCTCAGTGTGAAAGAAAGGAAAGAGCTTGCGTCTTATGCTCACAGTTTGGGGGATAAGCTCAAGACCCAGTTGGTCGGAAAATCTGGTGTTACGTCCAATGTTGCCACCTCTTTCATTGAGACCCTTGAAGCCAATGAACTTCTCAAGATTAAAATACATAGGAGCTGTCCAGGTGAGTTAGATGATGTGGTGAAGCAGTTGGAAGAAGCAACTGGTTCGGTGGCTGTTGGTCAAATTGGTCGAACTCTGATCATATATAGGCCCAGTGCAACCAAACTGAAAGAGGAAGAAAAGAAGAAACAAGTTCGTAACTTTATTCTGAAAAAGCAACTAAATTCAAGACTAGTTAACAAGAGTAGGGTTCAAGTTCCCAAATTATCGCGGCCTGGTTCTTCATGGAAAGGAAGAAAAAGTAGGCCATAA 768 0.4362 MAAVAAISSHLMFVLRLQPLPLSPSSSFFSFLKPLLVSSPNSISRPFPRLQFPPLRKSLCSISSSVVVSEDGEETEIGDDELDSERGDFGDTQLDSTSSPLVRKREERLKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSATKLKEEEKKKQVRNFILKKQLNSRLVNKSRVQVPKLSRPGSSWKGRKSRP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01531 255 Gene3D - 115 215 IPR035920 -
Vian5g01531 255 SUPERFAMILY YhbY-like 116 205 IPR035920 -
Vian5g01531 255 MobiDBLite consensus disorder prediction 233 255 - -
Vian5g01531 255 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 115 214 - -
Vian5g01531 255 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 251 - -
Vian5g01531 255 SMART CRS1_YhbY_2 116 202 IPR001890 GO:0003723
Vian5g01531 255 MobiDBLite consensus disorder prediction 70 101 - -
Vian5g01531 255 Pfam CRS1 / YhbY (CRM) domain 117 202 IPR001890 GO:0003723
Vian5g01531 255 ProSiteProfiles CRM domain profile. 114 213 IPR001890 GO:0003723
Vian5g01531 255 MobiDBLite consensus disorder prediction 72 86 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01531 K07574 - gmx:100779359 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01531 5 37894799 37896062 Vian5g01531 5 37894799 37896062 ECH