Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01530 ATGGTTTGCGCTAGTTCACTAATCCACCCAGCAAGCACCGTTTTAGTATCTTTGCCATCAATCCAAAGGCAAAAACGTGGGAATGTGTTATGTAATAATAAGGTAAGAAAACAAAGAGTAGCATCAATGTCTGTTGGTAACCAGAAAAATCAGAATTCAGAAGTAGCAAGTGTAAGAGAAGGTGAAAGGCTCTATCTGGGGTTTGACTTTGGCACATCTGGTGCCAGGTTTACCATAATCGACAAAGATGGAGCAATTCGAGCTGAGGCAAAGAGAGAGTACCCCTCGTACTTGAATGGAGAGTCACAGGATTGGGTACGCTCATGGAAGGAGACACTGTTTTCTTTGCTTGAAGATGTCCCACTTGACATTCGCAAACACGTTGTGGCTATTTCAATTGACGGGACTTCTGCCACTACTCTCATTGTTGATAGTTACACAGGGGAACCGTTGTGGAGACCTTTTCTTTACAATGAGAGTTGTTCTGATGCATTACCGGTGGTGAAGTCTATTGCTCCTCCAAACCATACGGTTTGCACTGGATCGTCCACTCTGTGTAAACTTGTCTCTTGGTGGAATCATGTTGGTTCGGATAAAAAACCTGCTTTGTTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGAAAGCTTGGAGTTACAGATTATAATAATGCTCTCAAGGTTGGCTATGATCCTGAAGTGGATTCGTATCCTTCGTGGTTAGTGTGTCAACCATATTATCATCTTTTACCTTCAGTTCTTGCTCCCGGAACTCCAATTGCTTGTTTAAAGGAGGAAGTTGGAAATAAATATGGTTTTCAAAAGGACTGTGTTGTATGCACCGGAACCACCGACAGTATAGCTGCATTTCTTGCAGCTCGTGCTAGCCAACCTGGGAAAGCTGTTACTTCATTGGGTTCAACACTAGCTATTAAACTACTCAGCAATACAAGAATTGAAGATTCTCGGTTTGGGGTTTACAGCCATCGACTTGATGATAAATGGCTAGTTGGTGGTGCTTCAAACACTGGTGGAGCAATCCTTAGACAGCTTTTCACCGATAACCAATTAGAAAAACTGAGTGAACAGATCAATCCTTCACAACCTTCTCCTCTGGACTACTATCCCCTGCCCAAAGCAGGTGAAAGATTCCCGGTAGCAGATCCAAATTTGGCTCCAAGGCTTCATCCACGTCCTGAAAATGATGTTGAGTACCTGCATGGGATTTTAGAATCCATTGCGCGTATAGAGGCAAAGGCATATGAGTTGCTAAAGGAGCTAGGAGCAACCCAGGTAGAGGAAATTTTCACTGCTGGTGGAGGAGCCAAAAATGAGAAGTGGATAAAGATTCGTGAGAGGGTGCTTGGTTTGCCTGTGAGTCGTGCAAATCAAACAGAAGCTGCATATGGAGCTGCATTATTGGCAAAAAAGGCTGATCAACAAAATATTCCTTCATAA 1464 0.4331 MVCASSLIHPASTVLVSLPSIQRQKRGNVLCNNKVRKQRVASMSVGNQKNQNSEVASVREGERLYLGFDFGTSGARFTIIDKDGAIRAEAKREYPSYLNGESQDWVRSWKETLFSLLEDVPLDIRKHVVAISIDGTSATTLIVDSYTGEPLWRPFLYNESCSDALPVVKSIAPPNHTVCTGSSTLCKLVSWWNHVGSDKKPALLLHQADWLLWLLHGKLGVTDYNNALKVGYDPEVDSYPSWLVCQPYYHLLPSVLAPGTPIACLKEEVGNKYGFQKDCVVCTGTTDSIAAFLAARASQPGKAVTSLGSTLAIKLLSNTRIEDSRFGVYSHRLDDKWLVGGASNTGGAILRQLFTDNQLEKLSEQINPSQPSPLDYYPLPKAGERFPVADPNLAPRLHPRPENDVEYLHGILESIARIEAKAYELLKELGATQVEEIFTAGGGAKNEKWIKIRERVLGLPVSRANQTEAAYGAALLAKKADQQNIPS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01530 487 SUPERFAMILY Actin-like ATPase domain 64 292 IPR043129 -
Vian5g01530 487 SUPERFAMILY Actin-like ATPase domain 299 480 IPR043129 -
Vian5g01530 487 Gene3D - 291 484 - -
Vian5g01530 487 PIRSF GlpK 62 484 IPR000577 GO:0005975|GO:0016301
Vian5g01530 487 Gene3D - 61 290 - -
Vian5g01530 487 FunFam D-ribulose kinase 61 290 - -
Vian5g01530 487 Pfam FGGY family of carbohydrate kinases, N-terminal domain 64 293 IPR018484 GO:0005975|GO:0016301
Vian5g01530 487 PANTHER SUGAR KINASE 64 481 - -
Vian5g01530 487 FunFam D-ribulose kinase isoform X1 291 484 - -
Vian5g01530 487 Pfam FGGY family of carbohydrate kinases, C-terminal domain 331 478 IPR018485 GO:0005975|GO:0016301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01530 K22935 - gmx:100779892 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01530 5 37875394 37878864 Vian5g01530 5 37875394 37878864 ECH