Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian5g01518 | ATGAATCGGGAAAAGTTGATGAAGATGGCTGGTTCGGTTAGAACTGGAGGGAAGGGTACCGTGAGAAGAAAGAAGAAGGCCGTCCACAAGACCACAACCATAGATGACAAAAGGCTTCAGAGCACTCTGAAGAGAATAGGGGTGAATGCCATTCCTGCAATTGAGGAGGTCAATATCTTTAAGGATGATGTAGTTATCCAGTTTCTAAATCCCAAAGTTCAAGCATCTATTGCTGCAAACACTTGGGTTGTCAGTGGTTCTCCACAAACAAAGAAGTTGCAGGATATACTCCCCAGCATTATCCACCAATTAGGACCAGATAACCTAGAAAATCTTAAGAAGCTTGCGGAGCAGTTTCAGAAGCAGGCTCCCGAAGGAGCTGCTGGCTCAGCAGAAGCTCAAGAGGAGAATGACGACGACGTCCCAGAGCTTGTTGCAGGACAGGATTTTGAGACAGCTGCCGAGGAGACCAAGGCATCTTAG | 483 | 0.4679 | MNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTIDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEGAAGSAEAQEENDDDVPELVAGQDFETAAEETKAS | 160 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian5g01518 | 160 | Pfam | NAC domain | 36 | 91 | IPR002715 | - | |
| Vian5g01518 | 160 | CDD | NAC_BTF3 | 4 | 119 | - | - | |
| Vian5g01518 | 160 | Gene3D | - | 48 | 104 | IPR038187 | - | |
| Vian5g01518 | 160 | SMART | NAC_2 | 36 | 91 | IPR002715 | - | |
| Vian5g01518 | 160 | PANTHER | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER | 1 | 157 | IPR039370 | - | |
| Vian5g01518 | 160 | ProSiteProfiles | NAC A/B domain profile. | 33 | 97 | IPR002715 | - | |
| Vian5g01518 | 160 | MobiDBLite | consensus disorder prediction | 119 | 160 | - | - | |
| Vian5g01518 | 160 | FunFam | Transcription factor BTF3 homolog | 48 | 104 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian5g01518 | K01527 | - | gmx:100500153 | 286.189 |