Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01502 ATGGAAGGAACTGGAGGCAGCAGTGCCTCGGCTGCTGCACCCGTGAACCAAAAGTGGCAGGAATTTGCGAAGCTATTTCAATATTATCTGGATAAATCCACGCCACACGCCACGTATAGATGGATTGGGAGTTTGGTTATTGTGTCGATCTTTGTTTTGCGGGTTTTTTATGTCCAGGGATTTTACATCGTGTCTTATGGATTGGGCATCTACCTGCTGAATCTGTTGATTGGGTTTCTGTCACCGTTGGTCGATCCTGAAATGGAGCCTTCTGATGGGCCTTTGCTGCCGACTAAAGGTTCTGACGAGTTCAAACCGTTCATTCGCCGACTGCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCATTTATGATGACTTTCTTTTCTGTGTTTGATGTTCCTGTGTTCTGGCCAATATTACTCTGTTACTGGGTTGTTCTGTTTGTCCTTACTATGAGGCGCCAAATTGCACACATGATCAAATACAAATACATACCATTCAACATTGGAAAGCAGAAATATACTGGCAAAAGATCCTCTGCAAGTAGCAGTGGCAGTCGTGCAGACTGA 585 0.4427 MEGTGGSSASAAAPVNQKWQEFAKLFQYYLDKSTPHATYRWIGSLVIVSIFVLRVFYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPEMEPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFMMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYKYIPFNIGKQKYTGKRSSASSSGSRAD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01502 194 Pfam Rer1 family 19 180 IPR004932 GO:0016020
Vian5g01502 194 PANTHER PROTEIN RER1 7 187 IPR004932 GO:0016020
Vian5g01502 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01502 Vian-Chr5 37596730 37598617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01502 1 194 Miscellaneous Gene Families AT2G21600 77.949 1.99e-113 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01502 - - gmx:100817031 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01502 5 37596730 37598617 Vian5g01502 5 37596730 37598617 ECH