Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01499 ATGGAGAACAATAGTAAGATTCTGATAATTGGAGCAACAGGGTTCGTCGGAAAATTCATGGTGGAAGCAAGTGTTAAAGCTGGTCACTCCACCTTTGCCCTGGTTCGAGAGTCCACTCTTTCTGATTCATCAAAATCATCCATCATTCAAACATTCAAAACCTTGGGTGTCAACCTGCTTTTGGGAGATATTAATGACCACCAGAGTTTGGTTAAGGCGATAAAGAAGGTGGATGTGGTGATATCTATGGTGAGTCACAAGCAATTACAAGATCAATATAACATCATTTCTGCTATTAAGGAAGCCGGAAATGTTAAGAGATTCTTTCCTTCGGAGTTTGGACATGATGTGGATCGAACTCATACTGTAAATGAAGGACAAGAGCTGTTTGACAGAAAAGCTAAACTTCGTCGAACCATCGAGGCTGAAGGAATTCCTCATACCTATGTTGTGGCTAACTTTTTCACTGGACACTTCCTACCCACTTTGTCAGAACTTCATTGGATAAAAACACCACTTGATAAGGTTGTTATTCTTGGGGACGGAAACATCAAAGTTGTTCTTAATACGGAAGAAGATGTTGCCACTTACACCATTAGAAGTGTTGATGATCCAAGAACCTTGAACAAAATTCTCTATGTCCGACCACCAGGTAACACCGTGTCGCACAATGATCTGGTATCTCTCTGGGAGAAGCATCACTGTGAAACTCTTAAAAGAGTCTATGTCTCGGAAGAGAAAGTTTTGAAGTATATTGAAGAATCTTCATATCCCATCAACATGGGTCTGTCAATTTGCCACTCTGCATATGTGAAGGGAGATCACACTAACTATGAAATTAAGCCTTCATTTGGATTTGAAGCTTCAATGCTCTACCCTGACGTGAAGTACACATCTTTAGACGAGTTCTTCCACCATAATGATGCTTGCACACCATTTTACTTGAACCAACTTATAACCGTTAATGATGGTGATTGTTTTCTCAAGAGTGCCCTAAAGAGGATCGAACTGCGGCATGCACCTCCAGCGAGCCGCACATCGAAGTCCGGTTTGCGGCGTGCACCTCCAGCTACGTTTGCCGCAGATCGAACTGCGGCATGCACCTCCAGCGAGCCGCACATCGAAGTTCGGTTTGCGGCGTGCACCTCCAAAGGAGATATTCATGACCATCAGAGTTTGGTTAAGGCGATAAAGAAGGTGGACGTGGTAATATCTACTGTGAATCACAGGCATTTACAAGATCAATATAAGATCATTTCTGCTATTAAGGAAGCCGGAAATGTTAAGAGGTTCTTTCCTTCGGAGTTTGGAAATGATGTGGATCGAACTCATGCTGTAAATGAAGGACACGAGCTATTGGACAAAAAAGTTAAACTTCGTCGAGCCATTGAGGCTGAAGGAATTCCTCGTACCTATGTTGTGGCTAACTTTTCCACTGGACACTTCCTACCTACTTTGTCAGAACTTCGTTCGATAAAAACACCACTTGATAAGGTTGTTATTCTTGGGGATGGAAACACCAATGAATCTTCATACCCCATCAACACGGGCCTGTCGATTTGCCACTCTGCATATGTGAAGGGAGATCACACTAACTATGAGATTAAGCCATCATTTGGATTTGAAGCTTCAATGCTCTACCCTGACGTTAAGTACACAACATTAGACGAGTTCTTCCATCATAATGATTCTTGCACGCCATTTTACTTGAACCAACTTATAACTGTTAATGATGTATAG 1740 0.4213 MENNSKILIIGATGFVGKFMVEASVKAGHSTFALVRESTLSDSSKSSIIQTFKTLGVNLLLGDINDHQSLVKAIKKVDVVISMVSHKQLQDQYNIISAIKEAGNVKRFFPSEFGHDVDRTHTVNEGQELFDRKAKLRRTIEAEGIPHTYVVANFFTGHFLPTLSELHWIKTPLDKVVILGDGNIKVVLNTEEDVATYTIRSVDDPRTLNKILYVRPPGNTVSHNDLVSLWEKHHCETLKRVYVSEEKVLKYIEESSYPINMGLSICHSAYVKGDHTNYEIKPSFGFEASMLYPDVKYTSLDEFFHHNDACTPFYLNQLITVNDGDCFLKSALKRIELRHAPPASRTSKSGLRRAPPATFAADRTAACTSSEPHIEVRFAACTSKGDIHDHQSLVKAIKKVDVVISTVNHRHLQDQYKIISAIKEAGNVKRFFPSEFGNDVDRTHAVNEGHELLDKKVKLRRAIEAEGIPRTYVVANFSTGHFLPTLSELRSIKTPLDKVVILGDGNTNESSYPINTGLSICHSAYVKGDHTNYEIKPSFGFEASMLYPDVKYTTLDEFFHHNDSCTPFYLNQLITVNDV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01499 579 PANTHER PINORESINOL REDUCTASE-RELATED 508 559 - -
Vian5g01499 579 Gene3D - 6 294 - -
Vian5g01499 579 Gene3D - 346 505 - -
Vian5g01499 579 Gene3D - 506 567 - -
Vian5g01499 579 Pfam NmrA-like family 7 237 IPR008030 -
Vian5g01499 579 Pfam NmrA-like family 384 510 IPR008030 -
Vian5g01499 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 384 507 IPR036291 -
Vian5g01499 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 271 IPR036291 -
Vian5g01499 579 CDD PCBER_SDR_a 6 303 IPR045312 GO:0016491
Vian5g01499 579 Gene3D - 154 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01499 Vian-Chr5 37561768 37568353 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01499 K23050 K13266 pvu:PHAVU_011G044500g 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01499 5 37561768 37568353 Vian5g01499 5 37561768 37568353 ECH