Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01490 ATGATTCCCAGCGCCGGAATCCCTAAAAAGCGGCAACGAACCGCCGCCCGCCGTTCCTCCTCCACTGTCGGCACCATCTCCTCCGTCTCAGACGTAACCCTAACCGAAATCTCCCAACAACACCGTCCCTCTTCCATGGCTGATGACCGTCCCTCGCCCATGGCGGACGACCGTTCCACTTCCTCCACAGATGAAGCTTTCCATTTCAACGACGCTGTCACTGCTGACGTCTTCCTCCGCCTCTTCATGGATTCTCCCTCTCCACTTCAGTCCTCCCCCACCGCCACCGCCACCTCTGATTCTGTTTCCAATTCCGACTTCCACGTTTACCTCCACTCCGACATCCTCCGTCGCTCCAAATATTTCTCTGCTCTCCTATCCGACCGGTGGATTGGCCACGTCCAAGCATCAGATCACGCAACCTCAACCGACGGCGACCGCTTCCTCCTCAACCTCGGTGTTCCCCCCGCTACTGGCTCGATCCAATCTCATCTCACCGTCCTGGAGCTTCTCTACACTAACGACTTCGCTGCCGTGGTGGATAGCGCTTCAACGGCGCTAGATCTGTTGCCGGTGGCGCTGGAGCTTCTGTTCGAGGAGTGTGTGCGTTGGTGCGTGGATTTCCTGGAGGCGGTGCCATGGACGGAGGAGGAAGAGAAGCGAGTGGTGAGATTAATCCCGTTCCTGAGCGAGGAAGAGTCGAAGGAGCTCGTGGCTAGGGTTTCGCCGTCGAGAGAGGACTCGTGCGAAGCGATGCTCGAGGGTCTGGTTTCGTCGGCGATGAACAGTTACGGCAACACGGCGTTCGTGAAGGCATTTGTAGGGAAGATACTGAGGGATTTGTCGTCGAGGGAGACGGCGAAGAGAGTGTTGGAGAAGGCGTTCGCTAGAAGCTTGAAGACGGTGAAGGAGTCGTTGGAGGATTATTCGAGTCCAGTGTTCAGAGGGGATCACAACGAAACGGAGGCCATTCAGAAGCTGAATCTGCACAAGGCTTCGACGAATGGGAAGCATCTTCTGTGGCTTGTGGAAAGAATGATTGAGCTTAGGGTTGCGGATGTGGCTGTGAGGGAATGGAGCGAGCAAGCGTGTTTCACCGCTGATTTGCAGAGGGCGTTTCGTGATGATTCTTGGAGGAACATTGTGCCTGGCCTTCCTGCTGTTATTCTTAGATGTACCTGCAGGCTCGCCAATGCTGTTTCTGCTGGCACTATTCTCGCTTCTAGACAGGTGAGAAGGAAGCTGGTAGAAGACTGGCTACCCGTTTTAGTGGTATGCAAAGATAATGTTTCCCCAATTTCACCGAGCAACAAATCGTTGTATCTGGAACTGGAAGAAACATTCTTACGTATCATCTCCACATTGCCCATGTCCGATGCTCAAGAATTGCTGCAGCGGTGCCTCAGCTTTTCAACCCGAAACGTTGAAGATTGTCCTCATTTGGTCACTGCATTCAACACCTGGTTCCGCCGTGCAGCCCGACCCCTCAAACCAGATTCTCTCTTTGATCAATAA 1515 0.5406 MIPSAGIPKKRQRTAARRSSSTVGTISSVSDVTLTEISQQHRPSSMADDRPSPMADDRSTSSTDEAFHFNDAVTADVFLRLFMDSPSPLQSSPTATATSDSVSNSDFHVYLHSDILRRSKYFSALLSDRWIGHVQASDHATSTDGDRFLLNLGVPPATGSIQSHLTVLELLYTNDFAAVVDSASTALDLLPVALELLFEECVRWCVDFLEAVPWTEEEEKRVVRLIPFLSEEESKELVARVSPSREDSCEAMLEGLVSSAMNSYGNTAFVKAFVGKILRDLSSRETAKRVLEKAFARSLKTVKESLEDYSSPVFRGDHNETEAIQKLNLHKASTNGKHLLWLVERMIELRVADVAVREWSEQACFTADLQRAFRDDSWRNIVPGLPAVILRCTCRLANAVSAGTILASRQVRRKLVEDWLPVLVVCKDNVSPISPSNKSLYLELEETFLRIISTLPMSDAQELLQRCLSFSTRNVEDCPHLVTAFNTWFRRAARPLKPDSLFDQ 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01490 504 MobiDBLite consensus disorder prediction 1 65 - -
Vian5g01490 504 Gene3D Potassium Channel Kv1.1; Chain A 55 241 IPR011333 -
Vian5g01490 504 MobiDBLite consensus disorder prediction 17 46 - -
Vian5g01490 504 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 57 493 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01490 Vian-Chr5 37453317 37455875 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01490 - - vra:106756147 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01490 5 37453317 37455875 Vian5g01490 5 37453317 37455875 ECH