Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01482 ATGGGCGAAAAATATAAGCCGTGGATCATCTTTCTTCTTCTACTGATAATCACGTGTTCTAGAGCCAGGGAATTGGTTGGAAGTGGAACAGAAAACAAAATCTTGGAAGCAATCTCTGATGAGAATCATGAAACAGTGCACACAGAACATGAACATGCACATGTTCATTCCCACACGGATCACATGAACCCTTCTGTGATGGTGTTCCTCACCTTGGAAGATTTGAAGATTGGAAAAACAATGGCAGTTTATTTTCCGAAGAGGGACCCTGCAACCTCCCCGAAGTTATGGCCGAGAGAAGAAGCTGAGTCACTCCCTTTCTCATTGAAAGAACTCCCAAACCTCCTAAAAGTGTTCTCTTTTTCTGCAAACTCTCCCCAAGCCAAAGCCATGGAAGACACCCTGAGGGAATGTGAGAGTAAAGCCATCAAAGGAGAGGTAAAGTTCTGCGCCACCTCTTTAGAATCCATGCTTGACTTTTCTCAAACCATTCTTGGCCTCACACACGAACTTCAAGTTTTCACCACCTCCCACCAAACCAAATCCAGTGTCACTTTCCAAAACTACACTTTCGAAAACATAGTAGAGATCCCAGCTTCCAAGATGGTGGCTTGCCACACCATGCCTTACCCTTATGCTGTTTTCTACTGTCACAGCCAAGAGAGTGAGAACAAGATGTATAAGGTGGCACTTGGTGGTGAAAACGGGGATAGGGTGGAAGCTATGGTTGTTTGTCACATGGATACCTCCCATTGGGGTCATGGTCATGTTTCATTTCAAGTTCTGAAGGTTGAACCAGGAACCACTTCTGTGTGCCACTTTTTCCCAGCAGATAATCTCATCTTGGTTCCCAAAGTTGAACAGCACGGTCTTTCAACCATGTGA 885 0.4486 MGEKYKPWIIFLLLLIITCSRARELVGSGTENKILEAISDENHETVHTEHEHAHVHSHTDHMNPSVMVFLTLEDLKIGKTMAVYFPKRDPATSPKLWPREEAESLPFSLKELPNLLKVFSFSANSPQAKAMEDTLRECESKAIKGEVKFCATSLESMLDFSQTILGLTHELQVFTTSHQTKSSVTFQNYTFENIVEIPASKMVACHTMPYPYAVFYCHSQESENKMYKVALGGENGDRVEAMVVCHMDTSHWGHGHVSFQVLKVEPGTTSVCHFFPADNLILVPKVEQHGLSTM 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01482 294 Pfam BURP domain 68 283 IPR004873 -
Vian5g01482 294 ProSiteProfiles BURP domain profile. 69 285 IPR004873 -
Vian5g01482 294 SMART BURP_2 67 285 IPR004873 -
Vian5g01482 294 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 37 284 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01482 Vian-Chr5 37376393 37377358 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01482 - - gmx:100800777 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01482 5 37376393 37377358 Vian5g01482 5 37376393 37377358 ECH