Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01474 ATGATTGGGCGCAGAGACAGAGAGGGACCCTTGATGAGGAACAACAACCCAAACTCTCTACGCAAATCCAGGGTCCTAACCGCAGTTGCAATTGGCGTCCTTATTGGATGCGTCTTCGCGTTCTTGTACCCCAATGGCTTCTTCGTTTCTGACTCTGTCGCTGCTAATCGCCGCCTCTCTAACGCAGGATCCATAGCCCAGGTTCCATTTTCGTCAAAGACTCTGCCTTTTTGCTCTTTCTTACTGTTTCAGCTTTCGGTATATCCTGAAAATCATGTCTGGTTGGTTTCTCTGCCTCGGGATGAAGCAATCTCCTGGTTTAGAAGCTTAACTGGAATTCTGTTTGAAAATTCAGCTGGATGTGAATCCTCAGATCGGGTCAACCTGTTGAAATCAGAGTTTGTAGCGGTATCAGAGAAGAATGCTGAGCTAAAAAAACAGGTGAGGGAATTGACTGAAAGGCTTCGCCTTGCAGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACGCTAGGTAAACAGGTTAAAGCTGGACCCTTTGGTACAGTAAAGGGACTGAGAACCAACCCTACTGTTGTTCCTGATGAGTCTGTGAACTCGAGATTGGGAAAGATATTAGAGAAAGTTGCAGTTAAACGAGAGCTTATAGTTGGACTTGCAAACGCCAATGTAAAGGAGATGCTGGAGGTATGGTTCACCAACATCAAGAGAGTTGGCATAACCAACTATCTAGTTGTTGCTTTAGACGATGAGATTGTGAAGTTTTGTGACTCAAATCAAGTGCCAGTGTATAAAAGAGATCCAGAAGATAGTGTTGATGTAATTGGAAGAATCGGGAGTAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATACAGTGTTCTTCTATCAGATGTGGACATTGTATATTTGCAGAATCCATTCGATCATCTATACCGGGATTCAGACGTGGAGTCGATGAGCGATGGTCACAGTAACATGACAGCATACGGCTATAACGATGTCTTTGATGAACCTGCAATGGGTTGGGCTAGATTTGCTCATACTATGAGGATATGGGTTTTCAACTCTGGTTTCTTCTATATTAGACCAACAATCCCTTCAATCGAGCTTTTGGATCGTGTGGCAACACGACTTTCGAAAGAGAAGGCTTGGGACCAGGCTGTTTTCAATGAGGAACTCTTTTACCCATCACATCCTGGTTATGATGGGCTTCATGCTTCCAGAAGAACTATGGATATGTATCTCTTCATGAACAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAATTGAAGCCTGTAATTATTCACGTGAATTACCACCCTGATAAACTTCCCCGAATGAAAGCAATTGTTCAGTACTACGTTGATGGAAAGCAGGATGCTCTCAAACCTTTCCCAGATGGCTCAAATTGA 1458 0.4362 MIGRRDREGPLMRNNNPNSLRKSRVLTAVAIGVLIGCVFAFLYPNGFFVSDSVAANRRLSNAGSIAQVPFSSKTLPFCSFLLFQLSVYPENHVWLVSLPRDEAISWFRSLTGILFENSAGCESSDRVNLLKSEFVAVSEKNAELKKQVRELTERLRLAEQGKDQAQKQFLTLGKQVKAGPFGTVKGLRTNPTVVPDESVNSRLGKILEKVAVKRELIVGLANANVKEMLEVWFTNIKRVGITNYLVVALDDEIVKFCDSNQVPVYKRDPEDSVDVIGRIGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHSNMTAYGYNDVFDEPAMGWARFAHTMRIWVFNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSHPGYDGLHASRRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAIVQYYVDGKQDALKPFPDGSN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01474 485 PANTHER ARABINOSYLTRANSFERASE RRA3 1 485 IPR044290 GO:0016757|GO:0080147
Vian5g01474 485 Pfam Nucleotide-diphospho-sugar transferase 241 459 IPR005069 -
Vian5g01474 485 SUPERFAMILY Nucleotide-diphospho-sugar transferases 217 416 IPR029044 -
Vian5g01474 485 Coils Coil 127 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01474 Vian-Chr5 37305395 37307566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01474 K20783 - gmx:100804189 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01474 5 37305395 37307566 Vian5g01474 5 37305395 37307566 ECH