Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01468 ATGGCTGTTCATACACCTGCAAGTTCATGTTTTGGAGCAAAGTATCAGACTCTAGCACCATTGAGAATTTTAAGGGGTCTGGTGTGTCTACTGGTTCTGCTTTCAACAGCATTTATAATGTTAGTGTTCTTTGGCTTTATAAGTGCTGTTATAGTTCGACTTTTTAGTGTCCGTTACAGCAGGAGAGCAACTTCCTTTTTCTTTGGTGCCTGGCTTGCCTTGTGGCCCTTTCTGTTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATGATGTTCCTTCGAGAGAACGGATCTTACTGATCGCAAATCATAGAACTGAGGTTGATTGGATGTATTTATGGGACCTTGCCTTGAGGAAGGGATGCCTTGGATATATAAAATATATACTTAAGAGCAGCTTGATGAGACTTCCAGTTTTTGGTTGGTCATTTCACATACTAGAGTTCATCCCAGTGGAAAGAAAGTGGGAGGCAGATGAGTCAATCATGCGCCGTATGCTTTCAACATTCAATGATCCACAAGATCCTCTCTGGCTTGCTCTTTTCCCAGAAGGCACTGATTTTACTGACCAAAAGTGCCTTCGGAGTCAAAAGTATGCTGCTGAACATGGGTTACCAGTTCTGAAAAATGTTCTACTTCCAAAGACAAAGGGCTTCTGCGCCTGTTTGCAAGAACTGAGGGAATCTCTCACTGCAGTTTATGATGTTACCATTGGCTACAAAAACCGCTGCCCATCTTTCTTGGACAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATGCATATTCGTTGCATCCCCATCGATACTATCCCAGTATCTGAAAGTGAAATGTCCACTTGGTTGATAAATAGATTCCAGTTGAAGGATCAGTTGCTTTCCAATTTTCAAATCCAAGGTCAGTTTCCTGATCCAGCAACACAAAGGGACCTCTCTGGTGTGAAGAGTATTTTAAATTGTATGACAATTGTTGCCGTGACAGGCACATGCATGTACTACAGTTTTTCCTCTGTCTGGTTTAAACTTTACGTGTCTCTAGTATGTGCTTATTTGGTTCCAGCCACCTATTTCAATATTCGGCCACAGCCCATTCATACCCTTTTGAAGATGAGATCAAATTACCACCTTTCAAATACATGA 1146 0.4145 MAVHTPASSCFGAKYQTLAPLRILRGLVCLLVLLSTAFIMLVFFGFISAVIVRLFSVRYSRRATSFFFGAWLALWPFLFEKINKTKVVFSGDDVPSRERILLIANHRTEVDWMYLWDLALRKGCLGYIKYILKSSLMRLPVFGWSFHILEFIPVERKWEADESIMRRMLSTFNDPQDPLWLALFPEGTDFTDQKCLRSQKYAAEHGLPVLKNVLLPKTKGFCACLQELRESLTAVYDVTIGYKNRCPSFLDNVFGVDPSEVHMHIRCIPIDTIPVSESEMSTWLINRFQLKDQLLSNFQIQGQFPDPATQRDLSGVKSILNCMTIVAVTGTCMYYSFSSVWFKLYVSLVCAYLVPATYFNIRPQPIHTLLKMRSNYHLSNT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01468 381 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 18 354 - -
Vian5g01468 381 SMART plsc_2 100 214 IPR002123 GO:0016746
Vian5g01468 381 CDD LPLAT_LCLAT1-like 76 266 - -
Vian5g01468 381 Pfam Acyltransferase C-terminus 254 321 IPR032098 -
Vian5g01468 381 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 29 247 - -
Vian5g01468 381 Pfam Acyltransferase 89 243 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01468 Vian-Chr5 37259777 37261601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01468 14 365 Miscellaneous Gene Families AT1G75020 60.623 2.14e-160 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01468 K13513 - gmx:100814885 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01468 5 37259777 37261601 Vian5g01468 5 37259777 37261601 ECH