Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01466 ATGAAGGCTTTCAGTGCCATAAATTCCACAAATCCATGTCTTCCCAATACCCATTTCCTCAAAGTCCCTATCTTTCATCCCTTCTTCAAATTCAATCCATTCGGCCATGATGCAAACAGAGCTCACAAGCTCCCATTCACCATCAGCTGCAAGCTGAAAAGCTCCCAAGATGTCGAAAACAAAGGGAAGAGCGTGTCCCAGAAGATTGTCTTATCAGAAGCTTCCTCTCCACCGCTTACTGAGGATGGTGTCACCAATGGTGACACTGGGGAAGTTCCACAGAGCTCAAAGAAAAAAAAGGGTGGCCCTTTTGGGTTGCTCAACATACTCAGAAGAAAGACTTTGCAGATTCTCTCTAGTTTGCCATTGGCTATTGCGGACATGTTTGCTGCTGCTGCTTTGATGGCTTTGGGAACAATTATTGAACAAGGTGAAGCTCCTGACTTTTATATCCAGAAATACCCTGAAGATGATCCTGTGTTTGGATTTTTTACTTGGAGATGGATTCTCGCCCTTGGTTTTGATCACATGTTTTCGTCCCCTGTATTTCTTGGAGTGTTGGCTCTCCTGGGTGCATCCCTCATGGCCTGCACATACACAACTCAACTCCCCCTTATCACGGTTTCAAGAAGATGGTCATTTTTGCATTCCGCTGAGGCTATACGCAAGCAAGAATTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTCTTTTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCCTTTAAAGGACTTGCAGGTAGGTTGGCCCCTGTTGGAGTTCATATAGCACTATTACTTGTAATGGCTGGAGGAACTGTTAGTGCTGCTGGGAGCTTCAGAGGTTCGGTCACTGTGCCCCAGGGCCTGAATTTTGTTGTTGGTGATGTTCTGGTTCCTTCTGGCTTTCTCTCCTCTCCAACTGAGGCTTTTAATACAGAAATTCATGTCAACAGATTCTCAATGGATTATTATGAGAGTGGAGAGGTTTCACAGTTCTACACTGATCTTTCCCTTCGTAACATGGATGGGAAAGAAGTAATGAGGAAGACAATCAGTGTAAATGATCCTTTAAGATACGGTGGTATCACCATATATCAAACAGATTGGAGTATTTCGGCTCTGCAAATTCTTAAGGATAATGAAGGACCGTATAACTTGGCTATGGCACCTTTACAGATCAATGGAGATAAGAAACTTTTTGGTACTTTTCTACCGGTTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCTCGTGATCTACAATCAATCGTCCTTTATGATAAAGAAGGAAAATTTGTGGGAGTTAGACGCCCTAATTCAAAGCTCCCAATCAATATTGATGGATCAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGACTGATCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTATCTCATTCACAGATATGGGCTTTACAAGATGGAACAACAGTCTTCATTGGAGGAAAGACTAACAGAGCAAAGATGGAGTTTCCGGAGGAGATGAACCTCTTACTTGATAAAGTCCCCGAAATTGTTGAATCAACTCTGTCTAAGCAAGCTGATAGCATTAGTGGTTAG 1680 0.4262 MKAFSAINSTNPCLPNTHFLKVPIFHPFFKFNPFGHDANRAHKLPFTISCKLKSSQDVENKGKSVSQKIVLSEASSPPLTEDGVTNGDTGEVPQSSKKKKGGPFGLLNILRRKTLQILSSLPLAIADMFAAAALMALGTIIEQGEAPDFYIQKYPEDDPVFGFFTWRWILALGFDHMFSSPVFLGVLALLGASLMACTYTTQLPLITVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTLLMGAGYEVFLKGPSLYAFKGLAGRLAPVGVHIALLLVMAGGTVSAAGSFRGSVTVPQGLNFVVGDVLVPSGFLSSPTEAFNTEIHVNRFSMDYYESGEVSQFYTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFVGVRRPNSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFIGGKTNRAKMEFPEEMNLLLDKVPEIVESTLSKQADSISG 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01466 559 MobiDBLite consensus disorder prediction 75 99 - -
Vian5g01466 559 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 61 548 IPR023494 -
Vian5g01466 559 Pfam ResB-like family 423 535 IPR007816 -
Vian5g01466 559 Pfam ResB-like family 123 386 IPR007816 -
Vian5g01466 559 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 111 540 IPR023494 -
Vian5g01466 559 MobiDBLite consensus disorder prediction 75 92 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01466 24 554 Miscellaneous Gene Families AT1G49380 67.283 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01466 K07399 - gmx:100807003 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01466 5 37238715 37243053 Vian5g01466 5 37238715 37243053 ECH