Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01461 ATGAAAAGAAGAGTCATGGCAGATGGATTAGAGAACATCAGTGAAGCTTCTTATCGTCCTGAAGTGGAACTGGGGAAACTAAAGCACAGCATTGAATCCAAGACGAGGCAATACAATAATATTGATCTTCAAAGCTCTTTGACTCAAGAGATTCTGCAGCTTCAAAAACGATTACAGCAACAATTCGTGATAAGGCGCGCATTAGAGAAAGCACGTTATCTGCCTTTTTCACAGGATGCTGCATTAGAAAATGCAATACCCAAGGCTGCAAAGGAACTGATTCAGGAAATTGGAATATTAGAATTAGAAGTTGTGTATTTGGAACAATACCTACTCTCTTTGTATCGGAAAAGATTTGATCAACAAATTTCATCTTTATCACCTAAGGAGAGAAGATTGGAATTAGCTTCAGACACAAATAAAGTAATATCTGCAGTGCCCAGCAATGGTGCTATTTCTGACAAAGAAATTTCTGTTGTGAACTGTAGTAATGTCATTTCACCCAGAAATTCTGTTGGCTTTCGCCTTAAGGAATGCAATAACCAGTTAGAATCAGAAACTGTCTTGGACTCTAGTATTCATCGATGTCACTCTGCACTATCTCAACGAACAGCATGCTCAATTGAAGCTTCTCCTGGGAACATTGAAACCAAAGCTGTAGTTGACTCTTACCATTCTCTGCCATTATCCATGTTGGAGCATTCTCTAATATCCGGCTTCCAAATTTTATTTCAGCAGCAAACTCAGTTTGCTAAATTCAGTTCAACAAGTCTGGCCGAGCATCTTGGGAGTAGCTATGTTGATTACGTTCCAGAAACACCCAATTGGCTTTCTGAGGAGATGATTAAGTGCATATCAGCTATATATTGTGAACTTGCAGAACCACCTTCTCTTGATCATAAAAATGCTTCATCCCCTATTTCGTACTCATCTTGTGGTAACGAGTTATCTTCACAGAGCCAGGGTAGTAAGGGGTGCAAAGAATTTAGCGAACCTTATTGCTCAATGACAAGGATACAGAAATTGTGCACAGATAATCAGAAATTAAAAGAAATTGAATACATGCTACGGAGATTTAGGTCACTTGTTTCTCGGCTGGAAGACGTTAATCCTAGAAATATGAGGCATGAAGAAAAGCTTTCCTTTTGGATTAATGTGCACAATTCCTTAGCAATGCATGTAAAATTTCTGAATCTCTTAATTTTTGTTTTTTATCTCGTGCATGTTATTGCTCCAAATCAGAACCATTATCATCCTCCTCGCTTTCCTCCACAGGCCTTGTTAGTTTATGGAATTTCAGCCAACAATGTTAAGAGAATGTCTTCAGTACTAAAGTGGCTGCGGTTGTGGTTTCCTTCAATGACAAAACCAAAGGTTAGAGATGCAAGAAAAGGATATGCAATACATCGTCCAGAACCTTTATTACTATTTGCTCTTTGCACAGGAAGCCATTCTGATCCTGCGGTTCGTTTGTACACACCTAAGAGAGTATTTGAAGAGCTACAATGTGCCAAAGAGGAATACATTCAGTCCAACATCACCATAAGCAAAGAACAGAAAGTAGTTCTCCCAAAGATGGTTGATTCCTTTGCAAAAAATTCAGGTCGAGGAGCATCTGATTTGATGGAGATGATTAAGCCTTATCTACCCGATTCTCAAAGGAAGAGCATTCAAGAGTTTCATTCAAAGTCAAGCTTGAAAAACATTGAATTAACTCCTCATAACTTCACTTTCCATTACTTGATTTCAAAGGAATTAGCTTGGTAA 1767 0.3848 MKRRVMADGLENISEASYRPEVELGKLKHSIESKTRQYNNIDLQSSLTQEILQLQKRLQQQFVIRRALEKARYLPFSQDAALENAIPKAAKELIQEIGILELEVVYLEQYLLSLYRKRFDQQISSLSPKERRLELASDTNKVISAVPSNGAISDKEISVVNCSNVISPRNSVGFRLKECNNQLESETVLDSSIHRCHSALSQRTACSIEASPGNIETKAVVDSYHSLPLSMLEHSLISGFQILFQQQTQFAKFSSTSLAEHLGSSYVDYVPETPNWLSEEMIKCISAIYCELAEPPSLDHKNASSPISYSSCGNELSSQSQGSKGCKEFSEPYCSMTRIQKLCTDNQKLKEIEYMLRRFRSLVSRLEDVNPRNMRHEEKLSFWINVHNSLAMHVKFLNLLIFVFYLVHVIAPNQNHYHPPRFPPQALLVYGISANNVKRMSSVLKWLRLWFPSMTKPKVRDARKGYAIHRPEPLLLFALCTGSHSDPAVRLYTPKRVFEELQCAKEEYIQSNITISKEQKVVLPKMVDSFAKNSGRGASDLMEMIKPYLPDSQRKSIQEFHSKSSLKNIELTPHNFTFHYLISKELAW 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01461 588 Pfam Protein of unknown function, DUF547 371 509 IPR006869 -
Vian5g01461 588 PANTHER UNCHARACTERIZED 34 445 - -
Vian5g01461 588 Pfam Leucine-zipper of ternary complex factor MIP1 43 121 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01461 Vian-Chr5 37168262 37171477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01461 - - gmx:100789011 872.463