Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01458 ATGGAAGGAAGAGTTTTCACAGAAGAGCAAGAAGCTCTTGTGGTCAAATCATGGGCAGCAATGAAGAAGAATGCTGGAGAACACAGTGTCAAGTTCTTCAAAAAAATATTGGAGATTGCTCCTGCAGCTCGGCCAATGTTCTCGTTCTTGAAAGATTCTAACGTCCCTTTGGAGGAAAACCCGAAGCTGAAGCCCCATGCCATGGCTGTCTTTGTCATGACCTGTGACTCGGCTGCTCAACTGAGGAAAGCTGGTAAAGTGACTGTGAGGGAATCAAACTTGAAAAAATTAGGTGCTTCTCATTTTAAAGCCGGTGTTGCACCGGAGCATTTTGAGGTAACAAAAATGGCACTTTTGGAGACAGTAAAAGAAGCAGTGCCTGAAATGTGGTCAGAGGCAATGAAGAATGCGTGGGAAGAAGCTCATGATCAGCTGGCTGATGCCATCATATCTGAAATGAAGCCCTCGTCTTAG 474 0.4515 MEGRVFTEEQEALVVKSWAAMKKNAGEHSVKFFKKILEIAPAARPMFSFLKDSNVPLEENPKLKPHAMAVFVMTCDSAAQLRKAGKVTVRESNLKKLGASHFKAGVAPEHFEVTKMALLETVKEAVPEMWSEAMKNAWEEAHDQLADAIISEMKPSS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01458 157 PRINTS Plant globin signature 60 88 - -
Vian5g01458 157 PRINTS Plant globin signature 32 52 - -
Vian5g01458 157 PRINTS Plant globin signature 7 24 - -
Vian5g01458 157 PRINTS Plant globin signature 125 151 - -
Vian5g01458 157 ProSiteProfiles Globin family profile. 6 154 IPR000971 GO:0020037
Vian5g01458 157 PANTHER LEGHEMOGLOBIN-RELATED 4 154 IPR001032 GO:0019825|GO:0020037
Vian5g01458 157 ProSitePatterns Plant hemoglobins signature. 60 71 IPR019824 GO:0019825|GO:0020037
Vian5g01458 157 SUPERFAMILY Globin-like 6 154 IPR009050 -
Vian5g01458 157 Gene3D Globins 5 151 IPR012292 GO:0019825|GO:0020037
Vian5g01458 157 Pfam Globin 31 149 IPR000971 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01458 Vian-Chr5 37154815 37155548 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01458 - - gmx:100809295 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01458 5 37154815 37155548 Vian5g01458 5 37154815 37155548 ECH