Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01450 ATGGCTGAGTTGTACACTGTGAAGGTGGAGGAGGCAAGGTTGGAAACTGATGAAAAACCTTCAGCAGGTCCTGTCTACAGGTGCATCTATGCCAGAGATGGTTTGATGGAGCTGCCTTCTCATTTTGAATCTCCATCGGACTTCTTCAGGGACACGACCAAGAGGTGTCCCAGCAACCCTATGCTGGGTCGGCGTCAAAAAACGGATTTGAAGGCTGGTCCCTATGAATGGATGACATATCAGGAGGCTTATGATGCTTCCATTCGAATTGGTTCAGCCATGAAGAGCCGTGGTGTCAATCCTGGAGACCGATGTGGCATATATGGGTCTAACTGCCCTGAATGGATCCTTGCAATGGAGGCTTGCAATAGCTACGCAGTAACATATGTTCCATTATATGACACCCTGGGTCCCAATGCTGTGGAGTTTATCATAAACCATGCTGAAGTTTCGATGGCATTTGTACAGGATAGCAAGATTCCTTCTGTTTTGTCATGCCTTGGTCGCTGTTCAAATCTTAAAACTATTGTGTGTTTCGGTAATGTTCTAACTGGACAAAAGAAGGAAGCTGAGGAGCTTGGCGTATCTTGCTTCTCGTGGGAAGAGTTTCTTAAGTTGGGAGATCTGGATTCAGACATACCACTGAAAAAGAAGACTGACATATGCACAATCATGTATACAAGTGGAACAACGGGTGAACCCAAAGGCGTCATTATTAAGAATGAGGCTTTCATGGCTCAAGTGTTGTCTATTGACCAAATGCTTGAATTAACTGACAAAGCGGGGACAGAAGACGATGTGTACTTCTCTTTCCTTCCTCTTGCTCATGTATATGACCAGATAATGGAGACCTATTGGGTTTATAGGGGTTCTTCAATTGGATTTTGGCAAGGAGATGTCAGGTTCTTAATGGAAGATGTTCAGGTGCTGAAACCAACAATATTTTGTGGTGTCCCTAGAATTTATGACCGTGTTTATGCTAGCATCAAAAGCAAAATTTCATCTACAGGAGCACTGCGAAGTACATTGTTTCAATATGCATATAGCTACAAGTTGGGATATATGGAGAAGGGTCTTCCCCAAGACAAAGCAGCACCTTTGTTTGATAAGCTTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGCGTTCGTCTTCTGTTATCGGGAGCTGCTCCTTTGGCCAGGCACGTGGAGGAGTTTTTCAGGGTCACTTTTGGAGCTACTATGCTGCAAGGATATGGTCTTACTGAAAGTTGTGGTGGGTGTCTCACTGCAATAAGCAATGTGTTTTCTATGATGGGAACAATTGGAGTCCCTACAACGACCATTGAGGCCAGGCTTGAATCTGTGCCAGAGATGGGCTATGATGCACTCTCCACTGAAGCCCGTGGAGAAATTTGCCTGAGAGGGAATACCTTGTTCTCTGGTTACCACAAGCGTCAAGATCTTACTGAAGAAGTTCTGGTTGATGGTTGGTTTCATACAGGTGACATTGGAGAATGGCAGCCAAATGGAGCCATGAAAATTATTGACAGAAAAAAGAATATCTTTAAATTGTCTCAAGGAGAATATGTTGCTGTGGAGAATATTGAAAACAAGTATTTACAGTGCCCCCTTATAACATCGATTTGGGTCTATGGAAACAGTTTTGAATCTTTTTTGGTGGCAGTGGTGGTCCCTGAAAGAAAGGCCCTTGAGGATTGGGCAGTGAAGAATAATTATACAGATGATTTTAAATCTTTATATGAAAATCCGAAGGCAAGAAAATACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGTTTTGAAATGCTAAAAGCAGTTCACCTTGAACCAATTCCCTTTGACATGGAGAGAGATCTGATAACTCCAACATTCAAGTTGAAGAGACCGCAGTTGCTCAAGCACTACAAGGATTGTATTGATCAACTATACAAGGAAGCAAAGGCATAG 1971 0.4292 MAELYTVKVEEARLETDEKPSAGPVYRCIYARDGLMELPSHFESPSDFFRDTTKRCPSNPMLGRRQKTDLKAGPYEWMTYQEAYDASIRIGSAMKSRGVNPGDRCGIYGSNCPEWILAMEACNSYAVTYVPLYDTLGPNAVEFIINHAEVSMAFVQDSKIPSVLSCLGRCSNLKTIVCFGNVLTGQKKEAEELGVSCFSWEEFLKLGDLDSDIPLKKKTDICTIMYTSGTTGEPKGVIIKNEAFMAQVLSIDQMLELTDKAGTEDDVYFSFLPLAHVYDQIMETYWVYRGSSIGFWQGDVRFLMEDVQVLKPTIFCGVPRIYDRVYASIKSKISSTGALRSTLFQYAYSYKLGYMEKGLPQDKAAPLFDKLVFDKIKQALGGRVRLLLSGAAPLARHVEEFFRVTFGATMLQGYGLTESCGGCLTAISNVFSMMGTIGVPTTTIEARLESVPEMGYDALSTEARGEICLRGNTLFSGYHKRQDLTEEVLVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFLVAVVVPERKALEDWAVKNNYTDDFKSLYENPKARKYILDELNSTGQKHQLRGFEMLKAVHLEPIPFDMERDLITPTFKLKRPQLLKHYKDCIDQLYKEAKA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01450 656 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 651 - -
Vian5g01450 656 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Vian5g01450 656 SUPERFAMILY Acetyl-CoA synthetase-like 39 652 - -
Vian5g01450 656 Pfam AMP-binding enzyme 69 521 IPR000873 -
Vian5g01450 656 CDD LC-FACS_euk 73 652 IPR045311 GO:0004467|GO:0006631
Vian5g01450 656 Gene3D - 34 513 IPR042099 -
Vian5g01450 656 Pfam AMP-binding enzyme C-terminal domain 531 600 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01450 Vian-Chr5 37121866 37127859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01450 5 656 Acyl Lipid Metabolism Gene Families AT4G23850 55.199 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01450 K01897 - gmx:100790068 1205.66