Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01428 ATGGCTAACCCTTCTGGGAATCACGAAGAAGAGCAGACAACCCATGTTGCGTCGTCGTTCAACGGGAATTTGGCAGCCGACACTTCGCCCACCGCGCTCGCCATGAAGCACAACTCTGGCATCGCCCTCGATTGGACCCCTCGGGAACAAACCATTCTCGAAGAAGGACTCTCTCTGTTTGCTTCTGAACCAAATCTCACTCGCTATGCAAAGATAGCAATAAATCTAAATAACAAGACAGTCCGGGATGTAGCACTGAGGGTCAGGTGGATGAATAAAAAGGAAAATTGCAAGAGAAGGAAGGATGAATTTTCAAGGAAAAGTAAAGATAGAAAGGAAAAGGTTTCAGATCCTGCAGTGAGATCATCTCACTTTACTGCTCAATCTAATGTTTCCCCATATTCTCCTGCAATGAAGATGATGGACAATGATGACAGCATCTGTCATAAAGCTATTGGAGACCCTGCAGGAGAGCTCTTAGAGAAAAATGCACAGGCCTTGAATAACATCTCTACCAATCTTGCTGCTCTTCAGTTTCAGGAGAACATCAATCTTTTCAGTCAAACGAGAGACAACATCATCAAAATTTTGAATGACATGAATGACATGTCAGAGGCAATGAAGCAAATGCCACCTCTACCTTTTAAGATCAATGAAACGATATTCAGCTCCATAATTCCAAACACCATTCACCAGATGCTATAG 705 0.4326 MANPSGNHEEEQTTHVASSFNGNLAADTSPTALAMKHNSGIALDWTPREQTILEEGLSLFASEPNLTRYAKIAINLNNKTVRDVALRVRWMNKKENCKRRKDEFSRKSKDRKEKVSDPAVRSSHFTAQSNVSPYSPAMKMMDNDDSICHKAIGDPAGELLEKNAQALNNISTNLAALQFQENINLFSQTRDNIIKILNDMNDMSEAMKQMPPLPFKINETIFSSIIPNTIHQML 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01428 234 CDD SANT 45 94 IPR001005 -
Vian5g01428 234 Gene3D - 45 117 - -
Vian5g01428 234 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 19 227 - -
Vian5g01428 234 Pfam Protein of unknown function (DUF3755) 177 209 IPR022228 -
Vian5g01428 234 MobiDBLite consensus disorder prediction 97 119 - -
Vian5g01428 234 MobiDBLite consensus disorder prediction 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01428 Vian-Chr5 36917848 36922366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01428 - - gmx:100775443 394.815