Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01427 ATGCCTCGTTACAAGGACGAGTCCCCTGCAGTGCGGGTTTACACTGTCTGTGATGAATCCAGATATTTGATTGTGAGGAACGTTCCAGAATTAGGATGTGGGGATGATTTGCTGCAACTTTTTTCATCCTATGGAGAAGTCGAGGAGTGTAAGCCCATGGATGCAGAAGACTGTGAGAAATACACTGATGTCTATTGGATCAAATTCCGCCTTGTCAGCAATGCTAGGTTTGCAAAAAGAAAATTGGATGATTTTGTTTTCTTCGGGAATAAACTGCAGGTTTCATATGCCCCCCAATTCGAGAGCCTATCGGACACACAAGATAAATTAGAGGGAAGAAGAAGGGAGGTTTTAGCGCGATTGAACCCAGCTAGAAGATCTAAAGAGACCCTAGCCACAAGCTCTAAAGAGACCCCAGCCACAAGCTCTGATGCTATGATTACATCAAATGTCAATAGTGCACAACATTTAGATTCTAATGCTTGGGATGTAGAATTCAAAGGAGGTTCACGCAGTAATTTTCCAACAAGGATTTCCTCTAATGAGGATTATTTTGCTTCACAGTCCATGAATCGAACAGTAAATTTTGTACGGAATAAGCTTGATAAGATTCGATCAAGTGGTGAGCATACAGAAGCTGGATCTGCGTCCAAGAAACAGCGGGTTGATAATAGGAGGAGAATTTAA 687 0.4207 MPRYKDESPAVRVYTVCDESRYLIVRNVPELGCGDDLLQLFSSYGEVEECKPMDAEDCEKYTDVYWIKFRLVSNARFAKRKLDDFVFFGNKLQVSYAPQFESLSDTQDKLEGRRREVLARLNPARRSKETLATSSKETPATSSDAMITSNVNSAQHLDSNAWDVEFKGGSRSNFPTRISSNEDYFASQSMNRTVNFVRNKLDKIRSSGEHTEAGSASKKQRVDNRRRI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01427 228 MobiDBLite consensus disorder prediction 205 228 - -
Vian5g01427 228 Gene3D - 16 114 IPR012677 -
Vian5g01427 228 MobiDBLite consensus disorder prediction 127 144 - -
Vian5g01427 228 SUPERFAMILY RNA-binding domain, RBD 8 102 IPR035979 GO:0003676
Vian5g01427 228 PANTHER UNCHARACTERIZED 3 228 IPR039599 -
Vian5g01427 228 FunFam RNA-binding protein 48 isoform X4 16 117 - -
Vian5g01427 228 CDD RRM_RBM48 11 110 IPR034264 -
Vian5g01427 228 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 92 IPR000504 GO:0003723
Vian5g01427 228 MobiDBLite consensus disorder prediction 123 144 - -
Vian5g01427 228 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 99 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01427 K24824 - gmx:100527829 369.007