Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01426 ATGGCGAGTCTTGTTCCTGGGGTGCTTCTCAAACTTATGCAGCATATGAACACGGATGTGAAAGTTGCTGGTGAGCACAGGTCCTCTCTGTTGCAAGTTGTGAGCATTGTTCCAGCTCTTGCCGGGGGTGAGTTGTTCCCAAATCAAGGCTTTTATCTCAAGGTTTCTGATTCCTTGCATGCCACCTATGTCTCTCTCCCTGATGAACATGATGATCTCATCCTCAGTGACAAGATTCAACTGGGGCAGTTTGTTTTTGTGGATCGTTTGGAGGCTGCTTCACCAGTTCCTATTCTTCACGGGGTTAGGCCTATTCCTGGGAGGCACGCTTGTGTTGGAACCCCTGAGGACATTGTTGCAACAACTCACTCTCTTGGGTTCCTTGGTAACGCTAAGGCTAAGAAGAACAGTGCTTGTTCTGGTCCCTTGGACTTAGAGAGATCCAAGTCTCCTAGGAAAGTGTTGGGGAATCACCACGTTGGGGAGAAGGAGAAGAAGGAGAAAGTAAGATTGCATAATGAAGAGCAGTTAGACAAGAAACCAGCTCTTTTGGCTAAGAGTAAATCTCAGACAACAAAAGCAGTGACAGCCAATACTGTTGATGTGAAGAAGGAACCATTGGCAAGATTGAAGTCATTTAATTCAAGGGCCATTCCTTCTTCCCCCACTAGTTGTTATTCTTTGCCTACTTCCTTTGAGAAATTTGCCAACGGGGTCAAGCATCAGGCAAACATCAAGGGAGTGGACAAGCTAACTGCGAAGGTGGGAGTGCTGGAAATAGGAAAGGGTGTCCGTGGAGCTAGTCCAACCGGGAAGAGAATTTCCATGGGAAACCCGATTAGAAATTTGGTTCAAGGAATTGAGCTTGGAGCTAAGGTGCTGCGTAAGAGCTGGGAAGGGAATATGGAAGTCAAGAATAAAGAGACATCAAAATCAAGGACTGCCAAGTCTGATCCTAAGCCTGAGGTTCGTGGCTCAACTCCTAGGAGAAGTACTTCAAGTGAAAAGTTTTCCTCTAAAGAAGAGAGCAAGCTGACAAAGTCCTCCAAGGAAGAGCACAGGACTCAAACAACTATAAAGAAAGTTGTTGCCAATGGAACTACGGAAGAACAAGAAAAGACAGGCAAGCCAAGAGTATCTGTTGGAAAGAAATCGTCAGAATTTTCAAACACTGGATTCCCTGGAAACTTGGTGAAAGTTTCTCCAAGCAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTGCCATCATCTATTGCAAAGCTTGGCAGGGAAGTGATGAAGCACAGAGATGCAGCACAGATGGCAGCAACTGAGGCTATTCAAGAGGCTGCTGCTGCTGAGAGTTTGCTGCAATGTCTAAGTGTATATGCAGAGCTAAGTAATTCTGCAAAGGAACAAAACCAGCAGCGTACAATAGAGCAGTTCCTAACTCTTCATGGTAGCCTAAACAGTGCAAGAATGATTGCTGACTCGTTATCCAAATCCATTCCAGATGATTCTTCTCTAGACAATGAAAGAATCATATCAGAAGAAGAACTAAAACTCAAATCAGACAGACAAAAGCTAGCAAATTATTGGGTCCAGGCTGCTTTATCCACCAATCTATCACCATTTTCTGTTTACAACCGAGAACCTCTATCATCCAGGCTTCCAGCATCAACCAATTCTCAAAACCAAAAGAATATCATGGGAAGCAAACCAATGCTGGTCATAGAAAATTCAAGTGAAGATACTTCATCAAAATCTCATGGAAAAATCCGTGCGGCTAATTCCAAACACGCCTTGCAAGGAACTCCTCGCAAAGCAGGTGATGCCTTATCAAATGGACACAAACAACTAGTCCAATCACCACGGGATTGGGTCAGAGGAAATGGGTTTGATGAAGTGGTTGATTTAATTGACATGCTGCAAGTGAAGTCAAGAGATTGGTTTCTTGTGTTTGTTGAGAGATTCTTGGACTCTGATGGGGACACTGCTAGCTTGTCAAATAATGGGCAAATAGCAGGTATGCTCACTCAGCTAAAAAGTGTGAATGATTGGCTTGATGAGATAGGATCAAGCAAGAATGAAGGAGAATCATGGCAGATACCAGCAGAGACAATTGACAGGTTGAGGAAGAAGATATATGAATATCTTCTTACACATGTGGAATCTGCAGCAGCAGCACTCACTGGTGGATCACAATCATCCCCTGGAATCCAAACCTCAGAGATCAAAGCCAAAAAGTGA 2238 0.4406 MASLVPGVLLKLMQHMNTDVKVAGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSLHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPIPGRHACVGTPEDIVATTHSLGFLGNAKAKKNSACSGPLDLERSKSPRKVLGNHHVGEKEKKEKVRLHNEEQLDKKPALLAKSKSQTTKAVTANTVDVKKEPLARLKSFNSRAIPSSPTSCYSLPTSFEKFANGVKHQANIKGVDKLTAKVGVLEIGKGVRGASPTGKRISMGNPIRNLVQGIELGAKVLRKSWEGNMEVKNKETSKSRTAKSDPKPEVRGSTPRRSTSSEKFSSKEESKLTKSSKEEHRTQTTIKKVVANGTTEEQEKTGKPRVSVGKKSSEFSNTGFPGNLVKVSPSSRKVTDASVQWASLPSSIAKLGREVMKHRDAAQMAATEAIQEAAAAESLLQCLSVYAELSNSAKEQNQQRTIEQFLTLHGSLNSARMIADSLSKSIPDDSSLDNERIISEEELKLKSDRQKLANYWVQAALSTNLSPFSVYNREPLSSRLPASTNSQNQKNIMGSKPMLVIENSSEDTSSKSHGKIRAANSKHALQGTPRKAGDALSNGHKQLVQSPRDWVRGNGFDEVVDLIDMLQVKSRDWFLVFVERFLDSDGDTASLSNNGQIAGMLTQLKSVNDWLDEIGSSKNEGESWQIPAETIDRLRKKIYEYLLTHVESAAAALTGGSQSSPGIQTSEIKAKK 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01426 745 PANTHER EXPRESSED PROTEIN 1 726 IPR010341 -
Vian5g01426 745 MobiDBLite consensus disorder prediction 300 325 - -
Vian5g01426 745 MobiDBLite consensus disorder prediction 300 395 - -
Vian5g01426 745 Pfam Plant protein of unknown function (DUF936) 4 726 IPR010341 -
Vian5g01426 745 MobiDBLite consensus disorder prediction 334 358 - -
Vian5g01426 745 MobiDBLite consensus disorder prediction 578 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01426 Vian-Chr5 36892573 36896566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01426 - - gmx:100775984 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00285 11 2702729 2706105 Vian5g01426 5 36892573 36896566 PCT