Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01424 ATGAGTGAAACTAAGGAAAGGAGTGGGTTTTGCGTGTGGCCGGATGCGAGACAACTTTGCTTGCGGAAAGGTCTTTTATATGGATTTATGCGATTATTTTCTATACCGTTAAAAACATTGCGTGGAGCTAGTCGGTCGTTGAGAGTAGATCAATTTTGCAGTGTAGTGAATCTATCTTCCACACTGCAGATTGAATTGGTTCCGTGCCTTAGGGACAGTTATGCATATCTTTTACATGATGTGGATACGGGGACAGTTGGTGTTGTTGATCCTTCCGAAGCTGCGCCTATTATAGAAGCTTTGAGTAAGAAAAATCTAAATTTGACTTACATACTGAACACCCACCACCATCATGATATCACTAGTGGAAATACAGAGTTGAAAGAAAGGTACGGGGCTAAGGTAATTGGATCAGAAATAGACAAGGAAAGAATTCCTGGTATTGATATTTATTTGAGTGATGGAGATAACTGGATGTTTGCAGGTCATGAGGTGCATATATTAGCTACACCTGGTCACACTGAAGGTCATGTATGCTTCTACTTTCCAGGATCGGCAGCAATTTTTACTGGAGACACCTTGTTCAGCTTATCATGTGGAGAGATCTTTGAAGGAACCCCTGAACAGATGCTATCTTCTCTTAAAAGAATAATGTCGTTGCCGGATGAAACAAGTATTTACTGCGGTCATGAATATACATTGAGTAATTCAAAGTTTGCCTTGTCCATAGAACCAGAAAACAAGGAACTTCAATCCTATGCTGCCCATGTAGCTCACATTAGAAATAAGGGCTTGCCCACGATTCCAACTACGCTTAAGATGGAAAAGGCTTGCAATCCATTCCTTCGCACATGGAGCATGGAAATCCGGCACAAGCTAAATATTGCAGCCACCGCAGATGATGCAGAAGCCCTGGGTGTTATTCGGCAAGCAAAGGATAAATTTTAG 948 0.4156 MSETKERSGFCVWPDARQLCLRKGLLYGFMRLFSIPLKTLRGASRSLRVDQFCSVVNLSSTLQIELVPCLRDSYAYLLHDVDTGTVGVVDPSEAAPIIEALSKKNLNLTYILNTHHHHDITSGNTELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEGHVCFYFPGSAAIFTGDTLFSLSCGEIFEGTPEQMLSSLKRIMSLPDETSIYCGHEYTLSNSKFALSIEPENKELQSYAAHVAHIRNKGLPTIPTTLKMEKACNPFLRTWSMEIRHKLNIAATADDAEALGVIRQAKDKF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01424 315 Pfam Metallo-beta-lactamase superfamily 73 230 IPR001279 -
Vian5g01424 315 PANTHER BETA LACTAMASE DOMAIN 56 315 - -
Vian5g01424 315 Pfam Hydroxyacylglutathione hydrolase C-terminus 231 315 IPR032282 -
Vian5g01424 315 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 315 IPR017782 GO:0004416|GO:0019243
Vian5g01424 315 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 314 IPR036866 -
Vian5g01424 315 PIRSF Glx 57 315 IPR017782 GO:0004416|GO:0019243
Vian5g01424 315 SMART Lactamase_B_5a 72 230 IPR001279 -
Vian5g01424 315 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 62 315 - -
Vian5g01424 315 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 230 IPR035680 -
Vian5g01424 315 NCBIfam hydroxyacylglutathione hydrolase 65 315 IPR017782 GO:0004416|GO:0019243
Vian5g01424 315 Gene3D - 62 315 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01424 Vian-Chr5 36872956 36875676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01424 K01069 - gmx:100805615 583.948