Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01419 ATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCTGCCACGAGTTGTATCATAGGATTATGCAGCATGATTTGGTTCTATATACAGAAGAAAAATATTGGGTATTCACACGTGGGTCTGAGTTATGAGACGGCAGTGGAAGGGCATTATTGGAGGATAATTACTTCTGCTTTTTCTCATATTAGTGTTATTCATCTTGTTTTTAATATGAGTGCATTATGGAGTCTTGGAGTGGTAGAACAGCTTGGGCACTTAGGCCTTGGTATTGAGTACTACTTGCAGTACACACTTGTGTTGGTTATTGTATCAGGAGTGCTAGTTTTGGCAATGTATCATTTGTTGATTCAGAGATTCAAGCTTGAGTATTTTCGTCGAGTGACAGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATTCTGTCTGTAAAGCAACCATCTTCCAAGTTGGATCTCTTTGGGTTTCTTTCTCTCCCTATCAGTTTTGCGCCGTTTGAATCTCTTATTTTCACTTCGATCATCGTTCCTCAGGCAAGTTTTCTTGGCCATTTGTCAGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAGCAATTACTGGGCACTCTCCTTGTTGGGATGGATTCTGCTTGTCTTTGTTTTTAGTTTGAAGAGATCTGGTGCTCTTGACCTAAGCTTTCTTGAGATTGAGTCTGTTACCGATCCTTCCTTGCCTTCTGTGCGGTTTTTGGCATCAAGCACTGGCAGAACACTTCAGATGAGTGCTTTGCCAAATGGAAATGTTGATATTGTCTAA 816 0.4093 MGKPLFYEILEKPATSCIIGLCSMIWFYIQKKNIGYSHVGLSYETAVEGHYWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGIEYYLQYTLVLVIVSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWILLVFVFSLKRSGALDLSFLEIESVTDPSLPSVRFLASSTGRTLQMSALPNGNVDIV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01419 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Vian5g01419 271 Gene3D - 10 200 IPR035952 -
Vian5g01419 271 PANTHER RHOMBOID PROTEASE 13 210 - -
Vian5g01419 271 FunFam RHOMBOID-like protein 13 9 201 - -
Vian5g01419 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01419 Vian-Chr5 36832785 36833600 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01419 - - gmx:100818954 519.235