Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01417 ATGGCCTCCACCAATGCTCTTCCTCCCACCGGTAACGGTCTCGTCGTCAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACCGTTTCCGGCGTCTCCCTCGCCGAGGCCCCGGGTTTCCTCAAGGCTCCCGGAGGCGCTCCAGCCAACGTCGCCATCGCCGTCGCAAGACTCGGCGGCAAGGCCGCTTTTATTGGCAAGCTCGGCGACGACGAGTTCGGCCACATGCTCGCTGGAATCCTCAAAGAGAACGATGTTAGATCCGACGGGATCAACTTCGACAAGAGTGCGCGCACTGCGCTCGCGTTCGTGACTCTACGCACAGATGGAGAGCGTGAGTTCATGTTCTACAGAAATCCCAGCGCCGACATGCTCCTCACGCCTGAAGATCTCAACCTCGAACTCATCAGATCTGCAAAGGTATTTCATTATGGATCGATAAGTTTGATCGTGGAGCCATGCAGATCAGCACACCTGAAGGCAATGGAAGTTGCGAGGGAAGCAGGGTGTCTGCTGTCTTACGATCCAAATCTGCGGCTACCGTTGTGGCCATCGCCTGAGGAAGCGCGTCAGCAAATACTCAGCATATGGGAGAAGGCTGATGTGATAAAGGTGAGCGATGTGGAACTGGAATTCCTAACCGGAAGTGACAAAATTGACGATGAATCTGCTCTCTCACTGTGGCATCCCAATTTGAAGTTGCTCCTTGTCACTCTTGGGGAACATGGTTCTAGGTACTATACCAAGAGTTTCCATGGATCGGTGGGCGCTTTTCATGTCAACACAGTTGATACAACTGGCGCAGGCGATTCCTTTGTTGGTGCTCTATTATGCAAGATTGTCGATGATCAATCCATACTTGAAGATGAAGCAAAGTTAAGGGAAGTACTGAAGTTTGCAAATGCGTGTGGGGCAATTACAACTACTAAAAAGGGAGCAATTCCCGCTCTTCCCACAGAGGCTGATGCTCTCAACCTGATCAACGAGGCATAG 993 0.5237 MASTNALPPTGNGLVVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFIGKLGDDEFGHMLAGILKENDVRSDGINFDKSARTALAFVTLRTDGEREFMFYRNPSADMLLTPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAREAGCLLSYDPNLRLPLWPSPEEARQQILSIWEKADVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGSRYYTKSFHGSVGAFHVNTVDTTGAGDSFVGALLCKIVDDQSILEDEAKLREVLKFANACGAITTTKKGAIPALPTEADALNLINEA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01417 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016301
Vian5g01417 330 Gene3D - 13 330 IPR029056 -
Vian5g01417 330 PANTHER HEXOKINASE FAMILY MEMBER 14 324 - -
Vian5g01417 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Vian5g01417 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Vian5g01417 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Vian5g01417 330 FunFam Probable fructokinase-2 12 330 - -
Vian5g01417 330 SUPERFAMILY Ribokinase-like 15 324 IPR029056 -
Vian5g01417 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Vian5g01417 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016301
Vian5g01417 330 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01417 Vian-Chr5 36821065 36824253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01417 K00847 - gmx:100780082 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00297 11 2783282 2786384 Vian5g01417 5 36821065 36824253 PCT