Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01407 ATGGTTCCATCCGATGTTTGTCCGACGGAAGATGCAATTAAGATATTTATAGAGCACTTGGTAGACCCATTGCTGCCAGCAAAGTCTTCTGTTCAGGATTACCCATCACCATCTCAACAGAAGTTAGTAGCAAGACAGGTGCGATCGGTTGTCTTACTTTACAATTACTACCAAAGGAAACGACATCCACAACTTGAATATCTTCCATTAAATGAATTTTCCAAGTTGGTTGTGGTTTTGAGGCCAGCTTTATTAGCACATATGCAATTCATGCAAAATTCACATGAAGAAGAGCTCACTAACGTGGAGAAGCAACTATCATTGACAGAAAAGATGATTATGGAAGCTTGTGATGTATCTAAATCTTTAGATGCATCAAAGAATGTTCCTAATATAGAGGGATGGCCCATTACAAAAGTAGCTATCCTTTTAATTGACAGTAAGAAGGAGAAATGCTTTTTGCTGTTTGGTTCCATTACCAGTGGGGTATGGTCTCTGGTAGAAAAAAGTTTGGACACCTCCAGCCAAAGTTCTCTGATTTCGAAAGGTCTGGACACCTCCTGCCAAAGTTCTCTGGGGTTGAAAGGTCTGGTTACCTCCAATCAAAGTTCTGAAGTTACACCGGGAACAAAACAATATAAAAAGAAAAGAGTCCTTAAAAAATCTTCAAAGGATGAATTAAAAGTCAACGAAGATGTGTTTCTGCAAGTTGGGTATTCTGCTATAAAGGAAGCCACAGGTATCAATAATACTGATATTTTTCTTTTGGAGAGTGGCACTATGTATTCTGAGAGTAAAGAGAAGGAAGCTTCTCGGTTTTATATAATGCAGTGCTCCGAGACGATCAATGAAGAAGTTTTTGAAGTTCCTATCCAAGATTTAATTAAAAGCTTGCAGGGACCTTTGGTCACTAAGAGTTCTGGAAGTTGGATGATCACTCCTGTAATGGACTACTTTCATGTGCTTCCATGCTATGAAGTAATATCAAAGTGGATATCCAGAGAAGCATTCTCAAATACTTTGCAAGATACAAGGGTAACAGAGAAAAATATAAAGGTGGACACCCCTGAAGTAACAGAATTTTATGTAAATGAGGACATGTTTACCGCTCATGATAGTAAGCCAAACAATGATAATATTGATTCACCAAAGCAGAAAGAGAACACTGGAAGTTGCACACTTGCATTATCTGATTCTATATATGAGCCCATGGAAATGACCATGAATGAAAATTCAATTTTAAAATCAAAGATCAAAGAAAAGTATCAGTATATTATTGACAATACTGTACAAGTAGATGAAGATCTTGAAAGAAATAATCCATGTGTGAAGTATAATTTTAACGGCCCTGCAAGTACTGTCAAGGCTTTAAATGTTGATTCAACAAATATGCTCGTTACTGAAGGTGGAACCAGCAATCTTGCTTCTTTGCACAATAGTTATGCCAATAGGCCCAATATCTCACCTGAAAAAGGCACTGTAGATGGCCGTATTCTGATTTCAAATCATTCTGCGTCAGATCAAGAGGAGCTCAAAGTTCTTTCAGATTCGAAAAAGATATTGACTCAAACTGCCCTAGCTACTTTGATACGAAGGAGGAATGAATTGGCCCTTCAGCAGCGCAAGATAGAGGACGAGATTGCTGTTTGTGATGGAAATATCCAGAAAATATTAAGTGACGGGGAAGATAACTTTAGATTAAAGATTGAATCAATTATAGAAGGCTGCAATGGTACATGGCTCTGGAATCAAGAAAGGGTGTGTGGACAACAAATCCCACCTCTTAAGAGGAAAAAATTGTCAGAGGCTGTCTTTATCACACAAAGTTCATGCCAGGAACTAGATGATATATGTCGCACAAACAATTGGGTCCTGCCAACTTATCATCTATCTCAATCAGAGGGTGGATTCAAAGCCAATGTAACTGTTAAAGGAGTGGAGTTTCAGTGTTCATTTGAAGGTAAAATGGGTTCCAGTCCTTCTGAAGCAAGAGAATCAGCTGCAGTTCAGATGATAACGAACTTGAGAAGTATAGCAAAATTAGAAGAGTGA 2052 0.3816 MVPSDVCPTEDAIKIFIEHLVDPLLPAKSSVQDYPSPSQQKLVARQVRSVVLLYNYYQRKRHPQLEYLPLNEFSKLVVVLRPALLAHMQFMQNSHEEELTNVEKQLSLTEKMIMEACDVSKSLDASKNVPNIEGWPITKVAILLIDSKKEKCFLLFGSITSGVWSLVEKSLDTSSQSSLISKGLDTSCQSSLGLKGLVTSNQSSEVTPGTKQYKKKRVLKKSSKDELKVNEDVFLQVGYSAIKEATGINNTDIFLLESGTMYSESKEKEASRFYIMQCSETINEEVFEVPIQDLIKSLQGPLVTKSSGSWMITPVMDYFHVLPCYEVISKWISREAFSNTLQDTRVTEKNIKVDTPEVTEFYVNEDMFTAHDSKPNNDNIDSPKQKENTGSCTLALSDSIYEPMEMTMNENSILKSKIKEKYQYIIDNTVQVDEDLERNNPCVKYNFNGPASTVKALNVDSTNMLVTEGGTSNLASLHNSYANRPNISPEKGTVDGRILISNHSASDQEELKVLSDSKKILTQTALATLIRRRNELALQQRKIEDEIAVCDGNIQKILSDGEDNFRLKIESIIEGCNGTWLWNQERVCGQQIPPLKRKKLSEAVFITQSSCQELDDICRTNNWVLPTYHLSQSEGGFKANVTVKGVEFQCSFEGKMGSSPSEARESAAVQMITNLRSIAKLEE 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01407 683 PANTHER ALEURONE LAYER MORPHOGENESIS PROTEIN 2 680 - -
Vian5g01407 683 CDD DSRM_SF 616 672 - -
Vian5g01407 683 Coils Coil 526 546 - -
Vian5g01407 683 Pfam double strand RNA binding domain from DEAD END PROTEIN 1 609 675 - -
Vian5g01407 683 Gene3D - 611 677 - -
Vian5g01407 683 Coils Coil 92 112 - -
Vian5g01407 683 SUPERFAMILY dsRNA-binding domain-like 611 675 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01407 - - pvu:PHAVU_011G055000g 1100.12