Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01387 ATGGATACCAGGCTGTCTCATGCTGATGCTGCTCATCCTGATGAATTAGATGAAGAGTTTGATTCATTCCCAACTTCACGGTCACCGGATATTGTTAGGATGAGATATGACCGTTTAAGAAGCATTGCAGGGAGAGTCCAAAGTGTTGTAGGAGACTTAGTCCTCTATGTTACTCCCTTTCAAGTTGTGTCACTTCTCATTGGCTTCTACATGCTTAGACACCCCAGATTCCGCAGGAGACTTCCATCAGTCCCACTCAACTTCTTCAGAAGGATGCCTGCTAGATCAGACAGCATGCTTTCTACCAAAAAAATGCTAACGACCAAACGTGTTGCATGGTCACTTAAGATGGATCTAGACAGACCAATAGAGGACCAGTTCTCCAAATTGCACCCTTCCTTGCCAGAACACACCAGAATTGGAATAGTTGGTGCTGGTCCAAGTGGCTTATCGGCAGCTTATGCACTAGCCAGGCTTGGTTATAAGAACATCACAGTCTTGGAGAAACATCATACGGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGAAAATGTCTATGCAGGAAAAGTTTATGATCTGGGTGGGCAAGTTCTTGCAGCAAACAGTGCTCCAGTCATTTTTCACTTGGCAAGAGAGACAGCCTCTGAACTAGAAGAATTGGACTCCCACAAGCTTGCTGTCATTGATCATAGAAAATATCAAGATACTAAAGTTGCTGATGATTATGTATCAGTTATGACACTTACATTGGAAATCCAAGAAAAGGTGAAGAATTGTAATCGTATTGGGGTCCATGCTGTTAGTGACATTGCTTCAGACTTAACTCCAGAATATCTTAAGCATCATGGACTCAAATCTGTTCCCAAATCTGTAGCTTATGGTTACACGGCTTCAGGATATGGATTTACCCAAGACATGCCTTATGCCTACCTTCATGAATTTACTAGAACGTCCATGGCTGGAAAAATTCGACGATTCAAAAATGGATATACAAGTCTGTGGCAGAAGATTGCTGAATCGCTTCCCTTAAAACTTTGTTGTAACACTGAAGTATTGGCAATCAGGAGGAACTCTGATGGTGTAACTGTTAAGACCAAGAGCTTAAATCAAGAAGTTGAAACTCTGGAATTTGATAAGATAATAATATCGGGCTCATTTCCATTAAAATATGGAAGAACTTACAGATCATTTCCTTCAACTTGCATAGAGCGTGAAACAGAAGTAATGGATGCAAGTGACCTTGAAAAGGAATTGTTCAGCAAAGTAGAGACAAATGACTACTACACCACTGTTATAAAGATAAACGGGCTAGAACATTTGCCTGTTGGATTTTACTATTTTAGTGAATATATGGAAGATCCCAGCACAATAGGACATCCAGTTGCAATGCAAAAGTTTTATGCTGGCACTAACATATTCTTATTCTGGTCCTATGGAAACTCTGTTGATATTAAGGGAGAAGCAGTCACGGAGCTTGCGATCAAGACAATAGAAGCCATGGGGGGAGAAGTTGAGAATGTCATTCTTCAACGCCGCTTTATGTACTTTCCTCATGTTGGTAGCCAAGATATGAAAGATGGGTTTTATGAAAAGTTGGAATCAAAGCTTCAAGGTTCAAGAAATACTTACTATGTAGGTGGACTCATGGCGTTTGAGCTAACAGAGAGAAATTCATCTTATGCCATGGCTCTGATCTGCAAGAACTTTGCACATAGCAATGATTTGCCAATATTTCCTTACACAAAGAATTTGTTTCCCTTGCAAACTGAGTCCCAGAAAAAGAATCCTAAAGAATTAGGTGAATTGGAAGAAGTGCAATTTCCTAATTTGCCTACTTTGAATAGCTACTTAAAGCACTGGGCAACTCATCCAATCACTCAAAACAGGATTCTGTATTCTTGGATTAATGAAGAAGGGACTCCAGTGTGGCGCAGGACCTACGGAGAACTGTATTTTAATTCTTCTTGCATTGCTCATAAGCTTGTAACAAACCAAAAGCCGGTTATAAAGCCAGGTGACAAGGTTCTCCTGGTCTATGTCCCCGGTTTGGATTTTATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATACCAGTTCCAATTCTTCCTCCAGATCCCATGCAAAGAAATGGACAAGCACTAAAGCAAATTGAAAATATTGCTAAGTCATGTAGCATTGTGGCAATTTTATCAACAGTTGCTTATCACTCAGCAGTCCGTGCAGGTTCATTGAAAAATTTAATCTCATTCGTTGGAAAAAATGAGAAATCTTTGGCTCGGTGGCCGAATCTCCCATGGTTGCACACTGATACATGGGTCAAGAAGTCCAAAAGTCAGGTCTTGGAACATCTTGATGAACAAGGTGAACCTGAGCCTGGTGACATATGTTTCTTGCAGTTTACCTCAGGTTCAACTTGTGATGCTAAAGGAGTCATGATCACTCATGGTGGGCTAATTCACAATGTAAAGTTGATGCGAAGAAGGTACAAGAGCACCTCAAGGACAATGCTAGTAAGCTGGCTTCCTCAGTATCATGACATGGGACTGATTGGAGGACTTTTTACATCTCTTGTTAGTGGTGCTTCTGCAGTATTATTTTCGCCAATGACATTTATCAAGAAACCGCTCTTATGGCTTGAAGTTATGAGCAAGTACCGAGCAACTCATAGTGCTGGCCCCAACTTTGCCTTTGAGTTAGTGATTCGAAGATTGGAGTCTCACAACGATAAGCTTCATAATTTAGACCTTTCATCCTTGACTTTTCTTATGGTTGCTGCTGAACCAGTGAGACCGAAGACCCTGAAAAGATTTGTTGAGCTAACCAGTCCGTTTGGCTTATCTGAAAAGGTGATGGCGCCTGGATATGGTTTAGCAGAAAATTGTGTGTTTGTCTGTTGTGCATATGGAGAAGGTAAGCCAATCATTGTTGATTGGCAAGAAAGAGTTTGCTGTGGTTATGTTAATCATGAGGATGCAGATATTGACATTAGAATAGTTAATCCAGAAACTCTTGAAGAGCTTGATGAATATGGAAAGGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGAATAGGATACTGGGGAAGGGAAGAATTGAGTCTAAAAACTTTCAGGAATGAACTTCAAAACCTTCCTGGACGCAGCTACACAAGAACTGGAGACTTGGGACGAATAATTGATCAGAAATTATTCATCACTGGAAGAATCAAAGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCGGATGTTGAGAAGACAGTTGAGACCTCGTCTGACATTCTTCGTCCTGGTTGCTGTGCTGTCATTGGAGTTCCTGAGGAAATTTTATCAGCAAAGGGGATTTCCACCCCAGATGGCTCTGATCAGGTAGGCTTGGTCGTGATTGCAGAAGTAAGGGATGGTAAGCCAGTCACCAAAGATGTGATTGAGAAAATTAAGACTCGTGTGGTGGAAGAACATGGAATCAATGTTGCTTCCATCAAGTTGGTCAAGCCCAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGGTTTGAATGTGTCAAACAGTTCAGTGATGAAACACTGAGCTTGATACCAATAGGTCCAACACCTGTTTTGAGAAAGAAGTCATTGTTAAGTTCGTTTACTACAGGAATTTTGAGAGAAGGAAAAACACCGGGGCCACTTGCACCAAGGAAAAGGATCAGTAAGAATGAAATTGTAGAGTTCTTGAAAGGGCTAATATCTGAGCAGACTGGAATCTCAATCAACAACATCTCAATCACAGACAACTTGACCTCATATGGAATTGACTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCTTAGCAACTCCGATTTCAGCCATAGATGTTTTCACTGCATCCTGCATTCTAGAATTGGCTAACTTCTGTGAAGATCTTCTATCAAAGTCTCAGCCTCAACTTACTAGCAATTCATCCAATGTTCCAGAAGCTCAGACTGGTTCCACTGAATTGATTGTGGAGGTATCCAAGTCTCGGCAGTTTGGTATCCGTGTACTTCAACTTCTATCCCTTATTTATATTTCTATCATTCTGGTGTCTCCTGCATATCTATCCGTCACTACTTATCAAAATTTCATCTTAAGTGCCAGTAAATGGATAGATGGATTTCCCTGGTTACATTACTTAGTTTCCCTGACTTTTGCACCTGTTGCATGGATTCTTTGCATGGCTTCTACTTGCATTTGCATATCATTATTTGGAAGCTCTTTCTTGGGGCCAAACTATGACCCTACCTCTGAAATTTCCATACATTCAATGGATTTTGTCAAGTGGTGGACACTGTATAAGGCCCAAGAAATTTCTTCTAGAGTTCTGGCGGTACACCTCAGAGGAACAGTGTTTCTGAAATGCTGGTTTGAGATGCTGGGCGCAAGGATCGGATCATCAGTTTTACTTGACACGGTTGACATCACAGACCCATCTTTGGTGTCAATTGGAGATGAAGTTATCATGGCTGAAGGTGTTTTGGTTCAAAGCCACGAGGTAAAGAATGGAATTTTATGTTTCCATCCTATTAGGATTGGCAAATGTTCTTCTATTGGACCTTATGCAGTTATCCAAAAGGGAAGTGTCATTGAAGAAGGTGCTGAGATACAGGCCTTGCAAAAGGTTGGACCAGACCAACATGTGTTCAAACCTGCAAAGCTTGATAATGGCATTAAGGTTCTCCAACCAACCTCTATCACCCCAACACTTTTCCTTTGTTTGCATAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATCTACGCCTTTTGGGTGCCAAAATTGGTAAGCATTGTTCCATCAGAGCCATCAACTCAGTTTCATATCCAGAGTTAATGTCAATAGGTTCCGGCGTCCATCTTGGAGATTTTAGCCGGATAATTACAGGTTTCCATTCTTCAAGTGGATTTGTCAGTGGAAAAATTGAGATTCAGGACAATTCGGTTATTGGGAGTCAAAGTGTAGTCCTACCTGGTTCTCTAGTCCAAAAGAATGTCATTCTCGGTGCACTTTCAGTTGCTAAAATGAATTCTACACTCCAAGAGGGTGGTGTCTACGTTGGATCAAAATCCCAAGCTGTCATAGTGAAGAATGCTTGTGATGAATGGATACAAGATATGGACAACATAAGCAAACAAAGAGTTGTTGATTTGGCTGCAGAACACCATAAAAATGACTCACAGAAATTGACACTGACCAGAACATGGTTTCAGACGTTCTCAGCACTCTTCACTCAGCCATTGCTAAAAACAGTGTTACCTCATATGGTGTTAGGTTTGGCAGTCTTTGCTCCCTTGAACTATGTTGTTTACCTAAAGAGTGACAAGAAACTTCAAATATATTGGTTGCTCCCATTGTTTTGGGTTCAGTCAGGAGCCTTAGCATCATTGGCATGTGTGATAGCGAAATGGGTTCTTGTGGGAAGGAAGAAACCAGGTGAAAGAGTGGATATATGGAGTCAAAGAATCACATTGGACAGCACATGGCAGGCCATTAGAAGCTTAGTTGGAGAGTATTTTATGGACATGACAAGTGGGTCATTTTGGCTTGTGGTGTGGATGAAGTTGATGGGTGCAGATGTTAATATGGAAGATGATGTTTACGTAGATAGCATGGGAGCCTTATTGAACCCAGAAATGGTGAAGATTGAGAGAGGAGGTTCTGTAGGAAGAGAAGCCTTGCTGTTTGGACACGTGTATGAAGGTGAAGGAGCAATGGTGAAATTTGGAGAGATCAGAATAGGAGAAGATGGTTTTGTAGGGAGTAGAGCTGTGGCCATGCCAGGTGTGCAATTACAGAATGGCAGCAATCTTGCTTCTTTATCACTTGCCATGAAAGAAGAAATCATTAGATCAAGCTGA 5913 0.4113 MDTRLSHADAAHPDELDEEFDSFPTSRSPDIVRMRYDRLRSIAGRVQSVVGDLVLYVTPFQVVSLLIGFYMLRHPRFRRRLPSVPLNFFRRMPARSDSMLSTKKMLTTKRVAWSLKMDLDRPIEDQFSKLHPSLPEHTRIGIVGAGPSGLSAAYALARLGYKNITVLEKHHTVGGMCESVEIEENVYAGKVYDLGGQVLAANSAPVIFHLARETASELEELDSHKLAVIDHRKYQDTKVADDYVSVMTLTLEIQEKVKNCNRIGVHAVSDIASDLTPEYLKHHGLKSVPKSVAYGYTASGYGFTQDMPYAYLHEFTRTSMAGKIRRFKNGYTSLWQKIAESLPLKLCCNTEVLAIRRNSDGVTVKTKSLNQEVETLEFDKIIISGSFPLKYGRTYRSFPSTCIERETEVMDASDLEKELFSKVETNDYYTTVIKINGLEHLPVGFYYFSEYMEDPSTIGHPVAMQKFYAGTNIFLFWSYGNSVDIKGEAVTELAIKTIEAMGGEVENVILQRRFMYFPHVGSQDMKDGFYEKLESKLQGSRNTYYVGGLMAFELTERNSSYAMALICKNFAHSNDLPIFPYTKNLFPLQTESQKKNPKELGELEEVQFPNLPTLNSYLKHWATHPITQNRILYSWINEEGTPVWRRTYGELYFNSSCIAHKLVTNQKPVIKPGDKVLLVYVPGLDFIDAFFGCLRAKVIPVPILPPDPMQRNGQALKQIENIAKSCSIVAILSTVAYHSAVRAGSLKNLISFVGKNEKSLARWPNLPWLHTDTWVKKSKSQVLEHLDEQGEPEPGDICFLQFTSGSTCDAKGVMITHGGLIHNVKLMRRRYKSTSRTMLVSWLPQYHDMGLIGGLFTSLVSGASAVLFSPMTFIKKPLLWLEVMSKYRATHSAGPNFAFELVIRRLESHNDKLHNLDLSSLTFLMVAAEPVRPKTLKRFVELTSPFGLSEKVMAPGYGLAENCVFVCCAYGEGKPIIVDWQERVCCGYVNHEDADIDIRIVNPETLEELDEYGKEGEIWISSPSAGIGYWGREELSLKTFRNELQNLPGRSYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTVETSSDILRPGCCAVIGVPEEILSAKGISTPDGSDQVGLVVIAEVRDGKPVTKDVIEKIKTRVVEEHGINVASIKLVKPRTISKTTSGKIKRFECVKQFSDETLSLIPIGPTPVLRKKSLLSSFTTGILREGKTPGPLAPRKRISKNEIVEFLKGLISEQTGISINNISITDNLTSYGIDSIGVVKATQKLSDFLATPISAIDVFTASCILELANFCEDLLSKSQPQLTSNSSNVPEAQTGSTELIVEVSKSRQFGIRVLQLLSLIYISIILVSPAYLSVTTYQNFILSASKWIDGFPWLHYLVSLTFAPVAWILCMASTCICISLFGSSFLGPNYDPTSEISIHSMDFVKWWTLYKAQEISSRVLAVHLRGTVFLKCWFEMLGARIGSSVLLDTVDITDPSLVSIGDEVIMAEGVLVQSHEVKNGILCFHPIRIGKCSSIGPYAVIQKGSVIEEGAEIQALQKVGPDQHVFKPAKLDNGIKVLQPTSITPTLFLCLHRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINSVSYPELMSIGSGVHLGDFSRIITGFHSSSGFVSGKIEIQDNSVIGSQSVVLPGSLVQKNVILGALSVAKMNSTLQEGGVYVGSKSQAVIVKNACDEWIQDMDNISKQRVVDLAAEHHKNDSQKLTLTRTWFQTFSALFTQPLLKTVLPHMVLGLAVFAPLNYVVYLKSDKKLQIYWLLPLFWVQSGALASLACVIAKWVLVGRKKPGERVDIWSQRITLDSTWQAIRSLVGEYFMDMTSGSFWLVVWMKLMGADVNMEDDVYVDSMGALLNPEMVKIERGGSVGREALLFGHVYEGEGAMVKFGEIRIGEDGFVGSRAVAMPGVQLQNGSNLASLSLAMKEEIIRSS 1970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01387 1970 SUPERFAMILY ACP-like 1236 1319 IPR036736 -
Vian5g01387 1970 Pfam AMP-binding enzyme 645 1078 IPR000873 -
Vian5g01387 1970 Pfam Phosphopantetheine attachment site 1243 1307 IPR009081 -
Vian5g01387 1970 Gene3D - 1073 1199 IPR045851 -
Vian5g01387 1970 SUPERFAMILY Trimeric LpxA-like enzymes 1854 1963 IPR011004 -
Vian5g01387 1970 SUPERFAMILY FAD/NAD(P)-binding domain 136 391 IPR036188 -
Vian5g01387 1970 Pfam Flavin containing amine oxidoreductase 148 386 IPR002937 GO:0016491
Vian5g01387 1970 SUPERFAMILY Trimeric LpxA-like enzymes 1606 1706 IPR011004 -
Vian5g01387 1970 Gene3D Hexapeptide repeat proteins 1449 1568 - -
Vian5g01387 1970 Pfam Plant phosphoribosyltransferase C-terminal 54 100 IPR013583 -
Vian5g01387 1970 Pfam Plant phosphoribosyltransferase C-terminal 1 53 IPR013583 -
Vian5g01387 1970 SUPERFAMILY Trimeric LpxA-like enzymes 1462 1562 IPR011004 -
Vian5g01387 1970 Gene3D Hexapeptide repeat proteins 1596 1748 - -
Vian5g01387 1970 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 1587 1737 - -
Vian5g01387 1970 CDD FAAL 619 1192 IPR040097 GO:0008610
Vian5g01387 1970 Gene3D - 599 1072 IPR042099 -
Vian5g01387 1970 Gene3D - 139 566 IPR036188 -
Vian5g01387 1970 Gene3D - 423 516 - -
Vian5g01387 1970 PRINTS Adrenodoxin reductase family signature 163 176 - -
Vian5g01387 1970 PRINTS Adrenodoxin reductase family signature 139 161 - -
Vian5g01387 1970 ProSitePatterns Phosphopantetheine attachment site. 1267 1282 IPR006162 -
Vian5g01387 1970 SUPERFAMILY Acetyl-CoA synthetase-like 611 1194 - -
Vian5g01387 1970 Gene3D - 1229 1311 IPR036736 -
Vian5g01387 1970 Gene3D - 215 321 - -
Vian5g01387 1970 ProSiteProfiles Carrier protein (CP) domain profile. 1238 1312 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01387 Vian-Chr5 36491711 36506358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01387 1 100 Lipid Metabolism Gene Families AT3G57880 64.122 4.10e-43 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01387 - - lja:Lj0g3v0205559.1 2272.66