Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01384 ATGGCTACAACAGCAACATCAGCACAGGTTTTCAAAGACTACAAGGACACAAGTAATGGAAACCCTGAAATTACGAGGCAGGAAATTCAGGCGGCCATAGCCAAAGCAGTGGAGCTGAGAGCTCTTCATGCGGCTTTGATGCGAGGAAATAGCCCAGCCAATGCTAGATTCCCATCCCCTTCCCCTGCTTCGCGCCCTGTTTCTCACTTCTCTGCCCAAGATTACCCTGTTTTCACTCCAGTGGGTATTAGCTATGAAGATGATCCACTGGTGGTGTACCATCAAAACTCCATGAAAAGCCTAACAGTATCAGAAAGTTGGGATGGGAGTCTTCTAGAAGGAGGAAACAGCAGAGAAACCATTGTAGCAGATTACAAGGAGAAATCAAGTTCAAGAAAAGGACTATATTCTGGTTTTGCCAACGTTGATTCTCACACATGCCCTACTGAAGATGCCAAATCCGTGACTGGCTCTTGCGCAAATCAAATAACTGTTCTGCAAACTTCACCTGCAAATGATTACTCCAAGGGTAGGAGGAGAAACAGCATGGAGGATTTCAAGTCCGTATCCTCCTGCAACAAATGCAACCCTGCCACCATAACTAGCGATTTTGAGAATGCAAGGAGCAGCAAGAGCTCCAACATTATTGTCCCAGTTACGGATTCACACTCATCTCTTCAATCCCAACCCAAAAGCAAGGGGGTGATTTCTTGGTTGTTTCCCAGGTTAAAGAAGAAACACAAGAATGAGAATTCCCCTAATAGAGCAGAATCTGAGGATGTTTCTCAGGTTCTCAAGGACTTGGGAATAATGTCAATGGAGACATTGAAGAAGGAGCTGGTGGAAGCAAATGAGAACCGAGATGTGGCCTTAATGGAAGTTTCTGAGATGAGAGGTTCATTGGGAGAGCTGAAACAGAAGCTGGAGTACTTGGAGAGTTACTGTGAAGAGCTGAAGAAAGCTCTAAAGCAAGCCGTGAAGACAAAGGATTCTCAACTTTGTGACCAACTTACTGATCTTCCTCAGAGGGGGAAACTATTTGAAGGAAATGGGGAAAATGTGATGCCTGTGAGTGAAGAAGTAATGGTAGAGGGATTCTTGCAGATAGTGTCAGAGTCCAGATTATCAGTGAAGCAGTTCTGTAAGACCCTTATTACTCACATTGAAGAGACTGATCATTCTTTGACAGAAAATTTGAACTTGCTTCTCCAACCTTACAAGTTATCTCTGAGTTCCAAGTTCTCAAAGGCAGTTCTATACCATTTTGAAGCTTTTATAAATCAGTCTCTCTACCAAGACTTTGAGAATTGTGTTTTCCAAAAGAACGGTTGCTCAAAATTCCTAGACCCTCAGCAGGATCGTCAATCACAATTCTCTTCTTTTGTTGCCCTTAGAAATTTGAGCTGGAATGAGGTACTGAGAAAGGGAACAAAATATTACAGTGAAGAGTTTAGCAAGTTCTGTGACCAGAAAATGAGTTGTATCAATACTACTTTAAAATGGACAAGGCCATGGCCTGAACAGCTTCTTCAAGCTTTCTTTGTGGCGGCAAAATGCATGTGGCTGCTACATTTGCTTGCCTTTTCTTTCAACCCTCCGTTGGGAATTCTAAGGGTTGAAGAGAATAAACTCTTTGATCCTCACTACATGGAGGATATGTGTCCAAGGTCACAAGGGCCAAGCAGAGTTAAGATCATGGTGATGCCGGGATTTTATGTTCAGGATAGGGTCTTGAGGTGTAAAGTTCTTTGCAGGTACAAGTCTGCAGCCTAA 1773 0.4326 MATTATSAQVFKDYKDTSNGNPEITRQEIQAAIAKAVELRALHAALMRGNSPANARFPSPSPASRPVSHFSAQDYPVFTPVGISYEDDPLVVYHQNSMKSLTVSESWDGSLLEGGNSRETIVADYKEKSSSRKGLYSGFANVDSHTCPTEDAKSVTGSCANQITVLQTSPANDYSKGRRRNSMEDFKSVSSCNKCNPATITSDFENARSSKSSNIIVPVTDSHSSLQSQPKSKGVISWLFPRLKKKHKNENSPNRAESEDVSQVLKDLGIMSMETLKKELVEANENRDVALMEVSEMRGSLGELKQKLEYLESYCEELKKALKQAVKTKDSQLCDQLTDLPQRGKLFEGNGENVMPVSEEVMVEGFLQIVSESRLSVKQFCKTLITHIEETDHSLTENLNLLLQPYKLSLSSKFSKAVLYHFEAFINQSLYQDFENCVFQKNGCSKFLDPQQDRQSQFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCINTTLKWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPLGILRVEENKLFDPHYMEDMCPRSQGPSRVKIMVMPGFYVQDRVLRCKVLCRYKSAA 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01384 590 Coils Coil 273 293 - -
Vian5g01384 590 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 24 588 IPR042316 -
Vian5g01384 590 Coils Coil 301 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01384 Vian-Chr5 36478535 36480969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01384 - - vra:106756465 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00332 11 3149192 3151200 Vian5g01384 5 36478535 36480969 PCT