Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01383 ATGGAGAAGTACTTGGTTTCGCGTAAACCCCCGATTGAAAGTGTTCGGCCACTTCCAAGAAGGAGGCGGTGGAAGAGGAGTTCGGTGGAACTTAATGGGAGATTTGAGCGTAACTATCGTCATGAGATGTTGGATCTGCTAATTCGATCGTATTCTGAGGTTGCAGTGTTTCCGCATCTGTATCAAGTGGATGGTTTGCCATGCCAGTCTCATACAAATCGACTGGTTGGTGAGGCAAATGGTGATGGCCATCTCCCACTTAGAAAGCAAGGCATCTCTGCTGTAGATTTTGACAAGAAGGGAATATACTTGGTGTCCGTGACAAAATCGGGTTGCTTAACAGTTCATGACTTTGAAACACTTTATTGCCAGATACCTGAGTTAACTTGCTTGCGAGAAGATGAAAACAAACATTTAATGCACCTCTCCCTAAATCGACAACTTGATGCTGTCAGATGGAATCCTCTTAATCAGGACGAGGTTGTTTGTGCATCTGTCAAAAGTAATGAACTGCTCATATTCGATATTGGATATGTCTCATCCGACCCAGTTGAAGTGTTAAGAACAAGACGTACAGCCACAGTTAATGGATCCACCTTGCACAAAGGTCTCTCTGATGTCACTTTTACGTCAAATGACACAAGGATACTTGCTTCTGATACACATGGTGCAATTAATGTGTGGGATAGAAGAGTGAACTCTCTACCTTGTCTTGAGCTTGCGTCTGCTTCATGTGGTACGCTTAACAGCATCCAATTAAATGCAGATAATCAGATTATTTTTGGTGCTGGAAAACATGGGCTCGTGCATGTATGGGATATTCGTGGTGGAAGAGCATCTGCCACTTTTCAAAGTCTCAAAGAGATATGCCATCCACCTGTAAAGTCAGTGAAGTTGGCAACATTGCTAGAGAAGATTGGATCTTTGAAGGCACAGGCAAATATTGTTCCCAAGGAGATTCACTCTATTAATATTAATCCATCATGCCCATATCAGTTAGCATTCCATCTTGTCGATGGCTGGTCAGGCGTTTTGGATATTAGTACTTTTGAAGTTACCCATATTCATTGCCCACCTCCTGCTTGGTTAAACGATTCCTACGTTCCCGCTGATCTATCATACTTAAGAAAACCTTCATGGTTATCAACTTGTTCGATCTATTTGGCCGGGTCATCATCTGATTGTGGTATCCATCTTTTGGATTTTTATCCCAGCACCAACTCACCGAGCCATGTTGATTACAAGGATGATATGCAAGAACTTTCAAGGCGGAAAAACCGAAGTAATCAGAACAGATTTATTTCTTTATCTGAAGGAGTTATCTCATGTGTTGCTCACCCTTTGTATAATGCCATCGTGGGAGGAACCAAGAAAACTTCTTTGCTCGTGATTTCTCAAAGGCATGAGTCATTCAGAAGTGAAGATTAG 1428 0.4216 MEKYLVSRKPPIESVRPLPRRRRWKRSSVELNGRFERNYRHEMLDLLIRSYSEVAVFPHLYQVDGLPCQSHTNRLVGEANGDGHLPLRKQGISAVDFDKKGIYLVSVTKSGCLTVHDFETLYCQIPELTCLREDENKHLMHLSLNRQLDAVRWNPLNQDEVVCASVKSNELLIFDIGYVSSDPVEVLRTRRTATVNGSTLHKGLSDVTFTSNDTRILASDTHGAINVWDRRVNSLPCLELASASCGTLNSIQLNADNQIIFGAGKHGLVHVWDIRGGRASATFQSLKEICHPPVKSVKLATLLEKIGSLKAQANIVPKEIHSININPSCPYQLAFHLVDGWSGVLDISTFEVTHIHCPPPAWLNDSYVPADLSYLRKPSWLSTCSIYLAGSSSDCGIHLLDFYPSTNSPSHVDYKDDMQELSRRKNRSNQNRFISLSEGVISCVAHPLYNAIVGGTKKTSLLVISQRHESFRSED 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01383 475 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 88 464 - -
Vian5g01383 475 Gene3D - 68 471 IPR015943 GO:0005515
Vian5g01383 475 SMART WD40_4 72 117 IPR001680 GO:0005515
Vian5g01383 475 SMART WD40_4 188 229 IPR001680 GO:0005515
Vian5g01383 475 SMART WD40_4 234 273 IPR001680 GO:0005515
Vian5g01383 475 Coils Coil 411 431 - -
Vian5g01383 475 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 282 IPR001680 GO:0005515
Vian5g01383 475 SUPERFAMILY WD40 repeat-like 87 454 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01383 - - gmx:100780441 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01383 5 36463358 36473862 Vian5g01383 5 36463358 36473862 ECH