Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01373 ATGGCTTCGTCACTCGCACTCCGATTCAGATCCCATCTCCTTCGCACCGCTTCACTCCTCCCCTCTTCCCTCCGCCGCCCTCCATTCCAACCCTCGTCGCCACTCCTCTCCGCCCAACGCCTCCTCTCCACGGCGCGCCGCTCGGCGCCACGCCCGCGGAAGTCGGTCGACATCGGCGCGCGCGCCCGGCAGCTCCAGACGCGGCGCCTCTGGGCCTACGCCCTGACTTTCAGCGGCCTCGCAGGGTTCGTGGTGATCGTGCTCAACAACTTTCAAGACCAGTTGGTGTTCTACATCACTCCCACAGATGCGCTTGAAAAGTACGCGACCAATCCCTCCAAGGCGCGGTTCCGGTTGGGAGGCTTGGTTCTCGAAGGCAGCGTGGTTTACCCGGCGTCGAAGCCGGAGGTGGAGTTCGTCATCACCGATCTGATCACTGACATCGTTGTCCGGTACGAGGGTTCCTTGCCGGATTTGTTTAGGGAAGGGCATTCCGTGGTGGCGGAAGGGATCGTGAAACCGTTCACGGAGGAGATCAAGAAGGAGGTGTCGACAAATAACGTGTCCGAGAAGGCCAGGAGATTGGAGTGTTATTTTTCTGCCGTGGAGGTTCTCGCTAAGCACGATGAGAAGTATATGCCGAAAGAAGTTGCCGCTGCTATTGAGAAGAATAAGAAGATTATTGAAGAAGCTGCCGCTGTCAGCGTAGCGGCGGAGGTACCCAAGACCACCTAG 735 0.5878 MASSLALRFRSHLLRTASLLPSSLRRPPFQPSSPLLSAQRLLSTARRSAPRPRKSVDIGARARQLQTRRLWAYALTFSGLAGFVVIVLNNFQDQLVFYITPTDALEKYATNPSKARFRLGGLVLEGSVVYPASKPEVEFVITDLITDIVVRYEGSLPDLFREGHSVVAEGIVKPFTEEIKKEVSTNNVSEKARRLECYFSAVEVLAKHDEKYMPKEVAAAIEKNKKIIEEAAAVSVAAEVPKTT 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01373 244 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 63 225 IPR004329 GO:0017003|GO:0017004|GO:0020037
Vian5g01373 244 Pfam CcmE 66 215 IPR004329 GO:0017003|GO:0017004|GO:0020037
Vian5g01373 244 Gene3D - 91 221 IPR012340 -
Vian5g01373 244 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 238 IPR004329 GO:0017003|GO:0017004|GO:0020037
Vian5g01373 244 SUPERFAMILY Heme chaperone CcmE 91 220 IPR036127 GO:0005886|GO:0017003|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01373 Vian-Chr5 36325403 36326137 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01373 - - gmx:100806496 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01373 5 36325403 36326137 Vian5g01373 5 36325403 36326137 ECH