Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01336 ATGACTCCCACTCTTACGTCCAATTCATCCCTCCTAACCACAACCCCCCATTCAAGGTTCACCCTCCGGAACCCAAGGCTCAGAGTCTTCGCCAAGAAGTCTGGATCATTCCCATCATTTGGGCTTGGCAAACCCAAAGATGATTCATCTTCTCCTGATGACAAAGATACCTCTTCCAATTCCAACCCTTTTCGTTTAGACTTTGGAAAGATACCCGATGTCACTTCCTTGATCCCAGTTCCAACCAACAATTCTTCGCCAGGCTTTTCATTTGGAAATCCAAGGCGCAAAGATCCTTCAACCGTCTTCGTTGCTGGCGCCACAGGGCAGGCTGGTATTCGCATTGCACAGACGCTTCTTAGGGAAGGTTTCAGTGTTCGGGCTGGAGTCTCCGAACTTGGCTCTGCACAGGAATTGGCTCGTCTTGCTGCTCAATACAAGATTATATCAAATGAGCAGGCAAAGCGTTTGAATGCTGTGCAATCAAGCTTTGACAACGCTGACTCAATAGCCAAAGCCATAGGCAACGCCAGCAAAGTGGTTGTCACCATTAGTTCCGCAGAGAACGGTCCAACAGCAGAGGTGTCGGCATCAGACGCATTGCAAGTGGTTCAGGCAGCACAGTTGGCCGGAGTTGGCCACGTGGCTGTCATCTACGACGAGAACGGCGTTGGGGCCTCAACCTACAATGTACTGGACGGTCTCTCCTCCTTCTTCAACAATCTCTTCTCTCGGTCTCAACCCTTGACCATACAAGAGTTCCTACAGAAAGTTATTGAAACTGACGTCAAATACACCTTCATCAAGACAAGTTTGACCGATGATTTCGCACCCGAAAGTTCCTACAATGTGGTCGTCTTGGGCGAGGGAAACACTAGTGCGAACGACTATAAAGTAGCGAAGTCCAAGATTGCATCGTTGGTGGCTGATGTCTTCGCCAATACTGAGGTAGCAGAAAACAAGGTCGTGAAAGTGTACTCGGATCCGAATGCCCCTTTGAAGCGTGTGGATGAACTTTTTAGTCCTATTCCCGAGGATGGAAGAAGGAAAGCCTATGCTGAAATGCAGGAGAAAGCAAAGGCAGAGGAGGCGGCAAGAGTGGCTGCAGAAAAAGCCAGTGAAGCAGCTGAATCAGCAAAGAAGTTGGAACAAGAGGTGAAAAAGCTTTCGCAGCAAGAAGCACTGGCTGCTAATCTGGCCCAAGAGGCACAAGAGAAGGCAGAGGCAGCTGGAGCCTCGGTGGAAAACCTCTTGAACAAGGCAAAAGACTTTGGTGCAGGGTTTTCCTGGGAAAAGTTGAGCTCACAGATTACTACTTCAATCCAAAACCCTGATGAGGATGAGAAACCAAAGGTTCAGCTAGCCACGGTAAGGGGACAGGCCAAGGCTCGGAACCTGGCGCCAAACAAAGCCGTGGTTAAACAAACTCCTCCGAGAAGAGCTGCTAGTAAACCAAAGGAGGAAAAACCGAAGAAGGAAGAGACAGCAAAAGAGGTGAGAAATGTATTTGGTGGCCTGTTCAAACAAGAGACTATCTATAACACAGATTAA 1551 0.4868 MTPTLTSNSSLLTTTPHSRFTLRNPRLRVFAKKSGSFPSFGLGKPKDDSSSPDDKDTSSNSNPFRLDFGKIPDVTSLIPVPTNNSSPGFSFGNPRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVSELGSAQELARLAAQYKIISNEQAKRLNAVQSSFDNADSIAKAIGNASKVVVTISSAENGPTAEVSASDALQVVQAAQLAGVGHVAVIYDENGVGASTYNVLDGLSSFFNNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFAPESSYNVVVLGEGNTSANDYKVAKSKIASLVADVFANTEVAENKVVKVYSDPNAPLKRVDELFSPIPEDGRRKAYAEMQEKAKAEEAARVAAEKASEAAESAKKLEQEVKKLSQQEALAANLAQEAQEKAEAAGASVENLLNKAKDFGAGFSWEKLSSQITTSIQNPDEDEKPKVQLATVRGQAKARNLAPNKAVVKQTPPRRAASKPKEEKPKKEETAKEVRNVFGGLFKQETIYNTD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01336 516 Pfam NAD(P)H-binding 106 314 IPR016040 -
Vian5g01336 516 Gene3D - 93 335 - -
Vian5g01336 516 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 332 IPR036291 -
Vian5g01336 516 MobiDBLite consensus disorder prediction 480 497 - -
Vian5g01336 516 Coils Coil 352 420 - -
Vian5g01336 516 MobiDBLite consensus disorder prediction 38 68 - -
Vian5g01336 516 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 514 - -
Vian5g01336 516 MobiDBLite consensus disorder prediction 459 497 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01336 - - gmx:100801140 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01336 5 36020265 36024646 Vian5g01336 5 36020265 36024646 ECH