Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01314 ATGGGCAGCCCCTCGAAGAAGAATGAAACTAAGGGGTTTTTCTCCGCCATGTCTTCCATCTTCACCAACGCTATGCATCGATCAGTCAATGGGCTTCTTGGATATGAAGGTGTGGAAGTCATTAATCCAGATGGAGGTAAAGAAGATGCAGAGGAGGAAGCAGAGAGAGGAAGATGGAAACAAGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAAATATATTGGCTCGGATGTAACATCAATGGTGACACTACCAGTTATTATCTTTGAACCGATGACTATGCTTCAGAAAATGGCCGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATGAATCAGAGGATCCATACATGCGGTTAGTTTATGCAACATCATGGGCTATATCGGTGTACTTTGCTTACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGACTAATCATGGCGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTGAAAACTAAGTTTTTGGGAAATTCTGTTGACGTTTACCCTGTTGGAAGAACGCGTGTGACTCTTAAGAGAGATGGTGTAATCTTGGATCTGGTGCCACCTCCTACAAAGGTTAACAACCTCATATTTGGCCGTACTTGGATTGATTCGCCTGGGGAAATGATAATGACTAATCTGACAACTGGAGACAAAGCTGTACTATATTTTCAACCATGTGGATGGTTTGGTGCCGGTCGATACGAAGTGGATGGATATATCTATAATTCATCCGAGGAGCCTAAAATATTAATGACTGGGAAGTGGAACGAGTCAATGAGTTATCAACAGTGTGATTCAGAAGGAGAGCCTCTCCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCAAAGAATGACAAATTTCAGTATACACATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAGTTGTTGGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCCGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAACCCGAGAAGAAAAAGGCCATAAGTTCGTGCCTAGATGGTTTGATTTAACTGAAGAAGTGACACCAACTCCTTGGGGTGATTTGGAAATTTATCAATATAATGGTAAATACATTGAACATCGGGCTGCTGCAGATAACTTGGGAAGCATTGATGATTGTGATGTTAAATCAATTGAATTCAATCCATGGCAGTATGGTAATTTGGCCACGGAATGA 1365 0.422 MGSPSKKNETKGFFSAMSSIFTNAMHRSVNGLLGYEGVEVINPDGGKEDAEEEAERGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADESEDPYMRLVYATSWAISVYFAYQRTWKPFNPILGETYEMTNHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVILDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQQCDSEGEPLPNTELKEVWHVADVPKNDKFQYTHFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEERQRAEKRTREEKGHKFVPRWFDLTEEVTPTPWGDLEIYQYNGKYIEHRAAADNLGSIDDCDVKSIEFNPWQYGNLATE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01314 454 SUPERFAMILY Oxysterol-binding protein-like 61 427 IPR037239 -
Vian5g01314 454 FunFam Oxysterol-binding protein-related protein 3C 356 449 - -
Vian5g01314 454 MobiDBLite consensus disorder prediction 364 386 - -
Vian5g01314 454 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 55 424 IPR000648 GO:0008289
Vian5g01314 454 Gene3D - 356 440 - -
Vian5g01314 454 FunFam oxysterol-binding protein-related protein 3C 148 325 - -
Vian5g01314 454 Gene3D - 148 325 - -
Vian5g01314 454 MobiDBLite consensus disorder prediction 369 386 - -
Vian5g01314 454 ProSitePatterns Oxysterol-binding protein family signature. 164 175 IPR018494 -
Vian5g01314 454 Pfam Oxysterol-binding protein 67 424 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01314 Vian-Chr5 35855271 35862285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01314 - - gmx:100810228 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00381 11 3537694 3542741 Vian5g01314 5 35855271 35862285 PCT