Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01312 ATGGCCGGCACCAGCCTCTCTCAAGTAATCCAATCGACGCTCCTGGAACTGCCCAGAACCACCGCCCACGTCAGAATCTCCGCCAAAAGCCACCGCGTCTCCGCCACCTCCGGCCATCGCCCCGAGGGACCCCACTGTATCTACGTTGGGCCCCTCGAAACCGCCGACAAAGAGAACCTCGAAGCTCTCTATTGCCAAGCACGGGATGCGTATAATAGTGGTCACCCTCTCATAATTGATGACATGTTTGATAAAGTGGAGTTAAGGTTAAGAAGCTATGGTTCAAAGTCTGTTGTCAAGTATCCTAGGTGCAGTATCAGGAGGCAATCCACATTTGCTGATGCTGAGGAAGATCTTTCTATGGTTTTTGCTTTAGCAAGCACATGGGCCATGTTCCTTGCATTTGGCAGTTTAGCATGTGTTGGGCCCATATCATTCACTGTTGGCATGGCTTATCAAAATGCATTCGCTTCAGGCGTATCACTTGGTAGCCAAACACCTGGAGTAAGCTTTCTGGCCTTGGTGAACAGCTTTATTTTCCTTGGGCTGGGTGTTATCATCGGCTACCCTGTTGCTTCAGCTTCAGTTAAGGTACTTCAAGGCCTGTGGAGGAATGATTTGGTGGCACTAAAAGGTGCGTGTCCAAATTGCGGGGAAGAGGTATTTGCATTTGTGAGAATGGACAGGAATATTGAGTCACCTCATAGAGCAGATTGTCATGTGTGTGAATGCGTATTAGAATTTCGAACAAAAGTGGAGCAATCAGTCTCAAGATTTGGTAGGCAGTGGGTTTATGGGCGTATTTATCTTGTTTCACTAAGAGGCAGATCTCGACGCCAATAA 843 0.4804 MAGTSLSQVIQSTLLELPRTTAHVRISAKSHRVSATSGHRPEGPHCIYVGPLETADKENLEALYCQARDAYNSGHPLIIDDMFDKVELRLRSYGSKSVVKYPRCSIRRQSTFADAEEDLSMVFALASTWAMFLAFGSLACVGPISFTVGMAYQNAFASGVSLGSQTPGVSFLALVNSFIFLGLGVIIGYPVASASVKVLQGLWRNDLVALKGACPNCGEEVFAFVRMDRNIESPHRADCHVCECVLEFRTKVEQSVSRFGRQWVYGRIYLVSLRGRSRRQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01312 280 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 59 272 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01312 Vian-Chr5 35843388 35845812 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01312 - - gmx:100810752 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00382 11 3544611 3546579 Vian5g01312 5 35843388 35845812 PCT