Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01281 ATGTCGGTGAGTTCGAGTTCCAGGGGAAGGATAACGACGGAGCTTCAAGTTCCCAAGAAATGGACTGACAGAGAAACCAGTCCAGAGAGAACCAAAGTTTGGGCCGAGCCCAAGCCCAAAACGGCCAGAAAAGTCTCCGTCGTCTACTACCTCTCCCGAAACGGCCAACTGGAACACCCTCATTTCATGGAGGTTCCTCTCTCTTCACCTCAAGGACTTTACCTCAAAGACTTCATCAACCGCTTGCACGTTCTCCGAGGGAAAGCCATGCCCACCATGTATTCTTGGTCCTCCAAACGGAGCTACAAAAACGGCTTCGTTTGGCACGATTTGTCGGAGAACGATTTCATCTACCCGACGCAGGGGCAGGACTACATTCTCAAAGGATCGGAGATTGTTGAGCACAGTGTCGCCGGCGTTGCGAGGGTTAACAAATCGGAAGAGGAGTCCGGCTCGCCTGTGGTGATCACGAGGCGGCGGAACCAGTCGTGGAGTTCTATCGATTTGAACGAGTACCGTGTTTATAAATCCGAATCGTTCGGCGACTCGGCTGGGAGAATCGGTGCTGACGCTGCCACTCAGACGGAGGAGAAGCGGAGGCGGAGGAGGGCGGCGAGGGAGGAAGAGGCGGAAGAGATTCACGAGAAGAATGATGGAATTGACGCGGGAATGGAAGGGGAGAGGGTTTCGCACGTGACTTGTGATAATAACAATAATCATACTACGGAGCTGAGCAGGGATGAGATCTCGCCTCCGCCGTCAGATTCGAGCCCTGAGACGCTGGAGACGCTGATGAAGGCAGATGGGCGGCTCGGATTGCGGTCTTCGGAATCGGAGAAGGAGAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCGTCGTCGGTTTTGTTGCAGTTGCTATCGTGTGGCGCTGTGTCTTTTAAGGAGTGTGGGGTTAACGCAGTGAAAGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGGATGCCCCGTGGAGCAGGGAATCACGTGGGAAAGGAGACAGGGATATCGATGGAAATTCCGGATTTGAACAGGCTTAGGTTGGAAGATAAGGAATATTTTAGCGGAAGCTTGATCGAAACCAAGAAAGTGGAAACCCCTACTTTGAAGAGGTCTTCTTCTTACAATGCAGATAGCGGTTCCCGGTTAGAGATAGTGGAGCACGAAGGAGAAGTGGTGCGGGCAAAGTGCATACCAAGGAAATCTAAGACACTACCAACAAAGAAAGATGAGGGTACTTCCACGCATATTGCTAGCGGTGGCCAACACGGGAGCAAAAGATTTGACTCACAACAATAA 1332 0.521 MSVSSSSRGRITTELQVPKKWTDRETSPERTKVWAEPKPKTARKVSVVYYLSRNGQLEHPHFMEVPLSSPQGLYLKDFINRLHVLRGKAMPTMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVEHSVAGVARVNKSEEESGSPVVITRRRNQSWSSIDLNEYRVYKSESFGDSAGRIGADAATQTEEKRRRRRAAREEEAEEIHEKNDGIDAGMEGERVSHVTCDNNNNHTTELSRDEISPPPSDSSPETLETLMKADGRLGLRSSESEKENLTVESCPSGRMRASSVLLQLLSCGAVSFKECGVNAVKDQGFSLVGHYKSRMPRGAGNHVGKETGISMEIPDLNRLRLEDKEYFSGSLIETKKVETPTLKRSSSYNADSGSRLEIVEHEGEVVRAKCIPRKSKTLPTKKDEGTSTHIASGGQHGSKRFDSQQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01281 443 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 24 432 IPR010369 -
Vian5g01281 443 MobiDBLite consensus disorder prediction 231 260 - -
Vian5g01281 443 MobiDBLite consensus disorder prediction 183 260 - -
Vian5g01281 443 Pfam Protein SOSEKI, plant 45 390 IPR010369 -
Vian5g01281 443 MobiDBLite consensus disorder prediction 1 29 - -
Vian5g01281 443 MobiDBLite consensus disorder prediction 192 225 - -
Vian5g01281 443 MobiDBLite consensus disorder prediction 422 443 - -
Vian5g01281 443 MobiDBLite consensus disorder prediction 408 443 - -
Vian5g01281 443 PIRSF UCP031043 12 433 IPR021182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01281 Vian-Chr5 35570463 35573834 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01281 - - gmx:100779732 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01281 5 35570463 35573834 Vian5g01281 5 35570463 35573834 ECH