Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01271 ATGGCACCCTTGAAATCGCTGGAGAAAGAGTACCCTCTCATTGACTCCAATTTTCAAAGCTTCTGTGCCTCACACGCCATTTTCTCTGTTCAAGATTTCCTTCTGCATGATATCGACGCATTAATTGCCTTGGCGGATAATCACTGTGCTTCACAGACTCTCAAGCAAGGAATAGACCAGCTTCTGTCAATAATAGATGCTCGTCATCCACCGTTGCTAAATGGCTTGCAGCTCTTGGAAGACGTTCAGCGGAATAAACATGTTTTGTCTACTGGATGTGAAGGGATTGACGCATTGCTCGGAGGTGGATTACGAGAAGGACAATTAACTGAACTTGTTGGGTCATCCGCATCAGGAAAGACACAGGCATGCCTACTGTCTGCTTCAACTGTTGCAAAACATAAGAGTTCAGTTATATACTTAGATACAGGCAACTCCTTTTCACCTCATCGTATTGCACGTTTTGTTGGCCAGTCTTCTGGTTATGATTCTGAAAATCAGGCTGATCATATGCTCAAAAAAGTATTGGACAGGATAATTTGCCACTCAGTGTTTGACATCTATCAGATGCTTGATGTGCTGCATCAACTGAAGATTAATTTAAGATCTGAGATTGTGAAATCAAATCAGCACGTTCGATTGCTTATTGTTGATTCAATCTCTTCACTGATTACCCCCATCCTTGGGGGCAGTAATCCTCAGGGACATGCTTTAATGATATCTGCTGGGTATTTACTGAAGAAGTTAGCTCATGAGCATAATATTGCTGTTTTGGTAACGAATCATGTGGTGCGTGGGGAAGATGGTATTTCCAAACCAGCTCTTGGAGAGAGTTGGAAGAGTGTCCCACATGTACGGCTTTTGTTTTCCCAAGATTGTGGAAGCAATGTGTGCAATATTTCAATGCTAAAACATCCATCTATGGCTTCTGGTAGAGCTGCAAGTTCTACTATGTTTTTATGA 963 0.4206 MAPLKSLEKEYPLIDSNFQSFCASHAIFSVQDFLLHDIDALIALADNHCASQTLKQGIDQLLSIIDARHPPLLNGLQLLEDVQRNKHVLSTGCEGIDALLGGGLREGQLTELVGSSASGKTQACLLSASTVAKHKSSVIYLDTGNSFSPHRIARFVGQSSGYDSENQADHMLKKVLDRIICHSVFDIYQMLDVLHQLKINLRSEIVKSNQHVRLLIVDSISSLITPILGGSNPQGHALMISAGYLLKKLAHEHNIAVLVTNHVVRGEDGISKPALGESWKSVPHVRLLFSQDCGSNVCNISMLKHPSMASGRAASSTMFL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01271 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 311 IPR027417 -
Vian5g01271 320 FunFam DNA repair protein RAD51 4 74 319 - -
Vian5g01271 320 CDD Rad51D 101 305 IPR047323 -
Vian5g01271 320 ProSiteProfiles RecA family profile 1. 85 263 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Vian5g01271 320 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 4 1 317 - -
Vian5g01271 320 Gene3D - 72 318 IPR027417 -
Vian5g01271 320 Pfam Rad51 87 296 IPR013632 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01271 K10871 - gmx:100780427 543.502